RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	MYL10	Q9BUA6	226 aa		12.04	□□□□□ -0.48
MRPL55-223	ENST00000459783	KAT14	Q9H8E8	782 aa		12.04	□□□□□ -0.48
MRPL55-223	ENST00000459783	SLC38A10	Q9HBR0	1119 aa		12.04	□□□□□ -0.48
MRPL55-223	ENST00000459783	SRRD	Q9UH36	339 aa		12.04	□□□□□ -0.48
MRPL55-223	ENST00000459783	PRR12	Q9ULL5	1215 aa		12.04	□□□□□ -0.48
MRPL55-223	ENST00000459783	PLXNB2	O15031	1838 aa		12.04	□□□□□ -0.48
MRPL55-223	ENST00000459783	TNPO2	O14787	897 aa	Known RBP	12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	EPB41L2	O43491	1005 aa	Known RBP	12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	ERCC3	P19447	782 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	MCM5	P33992	734 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	FLT3LG	P49771	235 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	STAT2	P52630	851 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	TROAP	Q12815	778 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	KIF22	Q14807	665 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	MORN1	Q5T089	497 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	GPR142	Q7Z601	462 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	MB21D1	Q8N884	522 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	RAVER2	Q9HCJ3	691 aa	Known RBP	12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	HPS5	Q9UPZ3	1129 aa		12.03	□□□□□ -0.48
MRPL55-223	ENST00000459783	COL11A1	P12107	1806 aa	Predicted RBP	12.02	□□□□□ -0.48
MRPL55-223	ENST00000459783	MGAM	O43451	1857 aa		12.02	□□□□□ -0.48
MRPL55-223	ENST00000459783	ATP2A1	O14983	1001 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	STAT3	P40763	770 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	GRM4	Q14833	912 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	WTAP	Q15007	396 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	SYDE2	Q5VT97	1194 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	DHX32	Q7L7V1	743 aa	Known RBP	12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	PLEKHH3	Q7Z736	793 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	NBPF11	Q86T75	865 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	FAM160B2	Q86V87	743 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	RAB11FIP4	Q86YS3	637 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	RIOX2	Q8IUF8	465 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	SHCBP1	Q8NEM2	672 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	ABHD8	Q96I13	439 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	AGBL1	Q96MI9	1066 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	JAKMIP1	Q96N16	626 aa	Known RBP	12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	MTA3	Q9BTC8	594 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	UBA5	Q9GZZ9	404 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	RANBP17	Q9H2T7	1088 aa	Known RBP	12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	MAD2L2	Q9UI95	211 aa		12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	ISY1	Q9ULR0	285 aa	Known RBP	12.02	□□□□□ -0.49
MRPL55-223	ENST00000459783	PALM3	A6NDB9	673 aa	Predicted RBP	12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	GNRH1	P01148	92 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	ELN	P15502	786 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	ZKSCAN1	P17029	563 aa	Predicted RBP	12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	RXRA	P19793	462 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	PTPRE	P23469	700 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	MAPK4	P31152	587 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	PLS1	Q14651	629 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	PKN2	Q16513	984 aa	Known RBP	12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	SNRNP48	Q6IEG0	339 aa	Known RBP	12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	ZNF654	Q8IZM8	581 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	CPXCR1	Q8N123	301 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	CHURC1	Q8WUH1	139 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	TMEM87B	Q96K49	555 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	BRPF3	Q9ULD4	1205 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	WDR19	Q8NEZ3	1342 aa		12.01	□□□□□ -0.49
MRPL55-223	ENST00000459783	COBL	O75128	1261 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	ZBED4	O75132	1171 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	IGHA2	P01877	340 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	LIFR	P42702	1097 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	CCNA1	P78396	465 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	IK	Q13123	557 aa	Predicted RBP	12	□□□□□ -0.49
MRPL55-223	ENST00000459783	GRB14	Q14449	540 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	KRT32	Q14532	448 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	CCL14	Q16627	93 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	ASPRV1	Q53RT3	343 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	GPATCH4	Q5T3I0	446 aa	Known RBP	12	□□□□□ -0.49
MRPL55-223	ENST00000459783	CCDC174	Q6PII3	467 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	SGMS1	Q86VZ5	419 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	NCAPG2	Q86XI2	1143 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	NPLOC4	Q8TAT6	608 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	SH3TC2	Q8TF17	1288 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	COA7	Q96BR5	231 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	IL17RA	Q96F46	866 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	TEX13B	Q9BXU2	312 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	JMJD4	Q9H9V9	463 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	HTT	P42858	3142 aa		12	□□□□□ -0.49
MRPL55-223	ENST00000459783	DOCK3	Q8IZD9	2030 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	ERICH2	A1L162	156 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	SLC15A5	A6NIM6	579 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	CCDC85C	A6NKD9	419 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	CYTH3	O43739	400 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	PPP1R11	O60927	126 aa	Predicted RBP	11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	PARP1	P09874	1014 aa	Known RBP	11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	CAST	P20810	708 aa	Known RBP	11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	CYP2B6	P20813	491 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	RPS6KB1	P23443	525 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	OAZ1	P54368	228 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	PRMT2	P55345	433 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	TRIM32	Q13049	653 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	IRF5	Q13568	498 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	SART3	Q15020	963 aa	Known RBP	11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	MUM1L1	Q5H9M0	696 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	WDR78	Q5VTH9	848 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	ADGRF4	Q8IZF3	695 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	TRIB2	Q92519	343 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	ARMC5	Q96C12	935 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	AGXT2	Q9BYV1	514 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	UPF3B	Q9BZI7	483 aa	Known RBP	11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms