RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 RAB34Q9BZG1 259 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 C6orf50Q9HD87 102 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 SAMSN1Q9NSI8 373 aaKnown RBP9.97□□□□□ -0.81
HDAC3-202ENST00000459727 BARHL2Q9NY43 387 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 SEC63Q9UGP8 760 aaKnown RBP9.97□□□□□ -0.81
HDAC3-202ENST00000459727 MKRN1Q9UHC7 482 aaKnown RBP9.97□□□□□ -0.81
HDAC3-202ENST00000459727 CTNND2Q9UQB3 1225 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 CCDC66A2RUB6 948 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 CTAGE9A4FU28 777 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 KCNJ18B7U540 433 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 GNPATO15228 680 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 PRDM1O75626 825 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 IPO7O95373 1038 aaKnown RBP9.96□□□□□ -0.82
HDAC3-202ENST00000459727 ATP2B4P23634 1241 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 PRDX5P30044 214 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 COPB1P53618 953 aaKnown RBP9.96□□□□□ -0.82
HDAC3-202ENST00000459727 KCNJ12Q14500 433 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 ZNF827Q17R98 1081 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 WHAMMP3Q1A5X7 153 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 ERCC6LQ2NKX8 1250 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 TCP11X2Q5H9J9 407 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 SOGA3Q5TF21 947 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 PPP1R18Q6NYC8 613 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 FOXR2Q6PJQ5 311 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 APTXQ7Z2E3 356 aaKnown RBP9.96□□□□□ -0.82
HDAC3-202ENST00000459727 GRAMD1CQ8IYS0 662 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 ZNF384Q8TF68 577 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 NELFBQ8WX92 580 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 RRP36Q96EU6 259 aaKnown RBP9.96□□□□□ -0.82
HDAC3-202ENST00000459727 NAP1L4Q99733 375 aaKnown RBP9.96□□□□□ -0.82
HDAC3-202ENST00000459727 ZMYND12Q9H0C1 365 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 ARFGAP3Q9NP61 516 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 ANKIB1Q9P2G1 1089 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 SUGT1Q9Y2Z0 365 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 ADGRG1Q9Y653 693 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 V9GYY5 206 aaPredicted RBP9.96□□□□□ -0.82
HDAC3-202ENST00000459727 IRS2Q9Y4H2 1338 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 CASZ1Q86V15 1759 aa9.96□□□□□ -0.82
HDAC3-202ENST00000459727 A0A087X0B3 334 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 CYP2D7A0A087X1C5 515 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 CCDC151A5D8V7 595 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 PALM3A6NDB9 673 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-202ENST00000459727 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 LGALS16A8MUM7 142 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 M0R2N6 131 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 RHOBTB3O94955 611 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 DNM2P50570 870 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 ADKP55263 362 aaKnown RBP9.95□□□□□ -0.82
HDAC3-202ENST00000459727 KRT83P78385 493 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 RBL2Q08999 1139 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 NONOQ15233 471 aaKnown RBP eCLIP9.95□□□□□ -0.82
HDAC3-202ENST00000459727 KRT31Q15323 416 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 RCSD1Q6JBY9 416 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 C3orf67Q6ZVT6 689 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 USP49Q70CQ1 688 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 SRGAP1Q7Z6B7 1085 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 CNBD1Q8NA66 436 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 FAM163AQ96GL9 167 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-202ENST00000459727 RPGRIP1Q96KN7 1286 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 ARID3AQ99856 593 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 CARD6Q9BX69 1037 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 ACBD3Q9H3P7 528 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 ABHD10Q9NUJ1 306 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 STK17AQ9UEE5 414 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 CDC23Q9UJX2 597 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 CCNL1Q9UK58 526 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-202ENST00000459727 ABCB11O95342 1321 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 MYO3BQ8WXR4 1341 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 PLIN4Q96Q06 1357 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 MYH2Q9UKX2 1941 aa9.95□□□□□ -0.82
HDAC3-202ENST00000459727 NAV1Q8NEY1 1877 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 FAM205CA6NFA0 338 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 STXBP3O00186 592 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 EIF3JO75822 258 aaKnown RBP9.94□□□□□ -0.82
HDAC3-202ENST00000459727 GYPCP04921 128 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 PARP1P09874 1014 aaKnown RBP9.94□□□□□ -0.82
HDAC3-202ENST00000459727 OR52Z1P0C646 297 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 CD44P16070 742 aaKnown RBP9.94□□□□□ -0.82
HDAC3-202ENST00000459727 RFC4P35249 363 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 CYLC1P35663 651 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-202ENST00000459727 CLCN6P51797 869 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 ST5P78524 1137 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 TMEM266Q2M3C6 531 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 ASPRV1Q53RT3 343 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 FIGNQ5HY92 759 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 EARS2Q5JPH6 523 aaKnown RBP9.94□□□□□ -0.82
HDAC3-202ENST00000459727 FAM47AQ5JRC9 791 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 IQCEQ6IPM2 695 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 CNNM4Q6P4Q7 775 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 BICDL1Q6ZP65 573 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 ARHGAP27Q6ZUM4 889 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 TOGARAM2Q6ZUX3 1019 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 C16orf86Q6ZW13 317 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 RSRC2Q7L4I2 434 aaKnown RBP9.94□□□□□ -0.82
HDAC3-202ENST00000459727 ADSSL1Q8N142 457 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 C4orf32Q8N8J7 132 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 OR8K1Q8NGG5 319 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 NEDD1Q8NHV4 660 aa9.94□□□□□ -0.82
HDAC3-202ENST00000459727 HNRNPLLQ8WVV9 542 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms