RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CTDP1Q9Y5B0 961 aaPredicted RBP25.7■■□□□ 1.7
CPNE1-220ENST00000458038 GPAA1O43292 621 aa25.69■■□□□ 1.7
CPNE1-220ENST00000458038 NDUFB10O96000 172 aa25.69■■□□□ 1.7
CPNE1-220ENST00000458038 APPP05067 770 aa25.69■■□□□ 1.7
CPNE1-220ENST00000458038 ZNF865P0CJ78 1059 aaPredicted RBP25.69■■□□□ 1.7
CPNE1-220ENST00000458038 SNRNP48Q6IEG0 339 aaKnown RBP25.69■■□□□ 1.7
CPNE1-220ENST00000458038 MAMDC4Q6UXC1 1216 aa25.69■■□□□ 1.7
CPNE1-220ENST00000458038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.69■■□□□ 1.73e-8■□□□□ 9.3
CPNE1-220ENST00000458038 PDLIM7Q9NR12 457 aa25.69■■□□□ 1.7
CPNE1-220ENST00000458038 IGKV6D-41A0A0C4DH26 115 aa25.68■■□□□ 1.7
CPNE1-220ENST00000458038 PATL2C9JE40 543 aaKnown RBP25.68■■□□□ 1.7
CPNE1-220ENST00000458038 ZNF467Q7Z7K2 595 aaPredicted RBP25.68■■□□□ 1.7
CPNE1-220ENST00000458038 NACAP1Q9BZK3 213 aa25.68■■□□□ 1.7
CPNE1-220ENST00000458038 MTMR4Q9NYA4 1195 aa25.68■■□□□ 1.7
CPNE1-220ENST00000458038 FEM1BQ9UK73 627 aa25.68■■□□□ 1.7
CPNE1-220ENST00000458038 TTC41PQ6P2S7 1318 aa25.67■■□□□ 1.7
CPNE1-220ENST00000458038 DNAJC25-GNG10A0A024R161 153 aa25.67■■□□□ 1.7
CPNE1-220ENST00000458038 ERC2O15083 957 aa25.67■■□□□ 1.7
CPNE1-220ENST00000458038 PGK1P00558 417 aa25.67■■□□□ 1.7
CPNE1-220ENST00000458038 FDX1P10109 184 aa25.67■■□□□ 1.7
CPNE1-220ENST00000458038 TLE2Q04725 743 aa25.67■■□□□ 1.7
CPNE1-220ENST00000458038 BADQ92934 168 aa25.67■■□□□ 1.7
CPNE1-220ENST00000458038 NUP88Q99567 741 aaPredicted RBP25.67■■□□□ 1.7
CPNE1-220ENST00000458038 FBXO40Q9UH90 709 aa25.67■■□□□ 1.7
CPNE1-220ENST00000458038 FAM184BQ9ULE4 1060 aa25.67■■□□□ 1.7
CPNE1-220ENST00000458038 TTLL1O95922 423 aa25.66■■□□□ 1.7
CPNE1-220ENST00000458038 SLC3A2P08195 630 aaKnown RBP25.66■■□□□ 1.7
CPNE1-220ENST00000458038 TAL1P17542 331 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-220ENST00000458038 PDE4BQ07343 736 aa25.66■■□□□ 1.7
CPNE1-220ENST00000458038 SHHQ15465 462 aa25.66■■□□□ 1.7
CPNE1-220ENST00000458038 ZNF697Q5TEC3 545 aa25.66■■□□□ 1.7
CPNE1-220ENST00000458038 STK11IPQ8N1F8 1099 aa25.66■■□□□ 1.7
CPNE1-220ENST00000458038 NUP133Q8WUM0 1156 aa25.66■■□□□ 1.7
CPNE1-220ENST00000458038 UNC80Q8N2C7 3258 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 TRIM43BA6NCK2 446 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 CLTBP09497 229 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 OAZ1P54368 228 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 PPP4R3BQ5MIZ7 849 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 IFNL3Q8IZI9 196 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 GMCL1P1Q8NEA9 526 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 CHST13Q8NET6 341 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 TRIM43Q96BQ3 446 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-220ENST00000458038 TOX2Q96NM4 488 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 SLC38A10Q9HBR0 1119 aa25.65■■□□□ 1.7
CPNE1-220ENST00000458038 EPB41L4AQ9HCS5 686 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-220ENST00000458038 A0A1W2PQ45 241 aaPredicted RBP25.64■■□□□ 1.7
CPNE1-220ENST00000458038 A0A1W2PQY0 241 aa25.64■■□□□ 1.7
CPNE1-220ENST00000458038 MOXD2PA6NHM9 499 aa25.64■■□□□ 1.7
CPNE1-220ENST00000458038 CEP95Q96GE4 821 aa25.64■■□□□ 1.7
CPNE1-220ENST00000458038 RIPK3Q9Y572 518 aa25.64■■□□□ 1.7
CPNE1-220ENST00000458038 ADAMTS4O75173 837 aa25.63■■□□□ 1.69
CPNE1-220ENST00000458038 DUSP11O75319 330 aaKnown RBP25.63■■□□□ 1.69
CPNE1-220ENST00000458038 SNAI1O95863 264 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-220ENST00000458038 SMAD3P84022 425 aaKnown RBP25.63■■□□□ 1.69
CPNE1-220ENST00000458038 SH3RF1Q7Z6J0 888 aa25.63■■□□□ 1.69
CPNE1-220ENST00000458038 CPXCR1Q8N123 301 aa25.63■■□□□ 1.69
CPNE1-220ENST00000458038 NEDD1Q8NHV4 660 aa25.63■■□□□ 1.69
CPNE1-220ENST00000458038 KIFC2Q96AC6 838 aa25.63■■□□□ 1.69
CPNE1-220ENST00000458038 ABHD16BQ9H3Z7 469 aa25.63■■□□□ 1.69
CPNE1-220ENST00000458038 PLIN4Q96Q06 1357 aa25.63■■□□□ 1.69
CPNE1-220ENST00000458038 M0R2C6 588 aa25.62■■□□□ 1.69
CPNE1-220ENST00000458038 KIAA0355O15063 1070 aa25.62■■□□□ 1.69
CPNE1-220ENST00000458038 TSPY3P0CV98 308 aa25.62■■□□□ 1.69
CPNE1-220ENST00000458038 TSPY8P0CW00 308 aa25.62■■□□□ 1.69
CPNE1-220ENST00000458038 TSHZ3Q63HK5 1081 aa25.62■■□□□ 1.69
CPNE1-220ENST00000458038 ANKRD33Q7Z3H0 272 aa25.62■■□□□ 1.69
CPNE1-220ENST00000458038 ANKRD35Q8N283 1001 aa25.62■■□□□ 1.69
CPNE1-220ENST00000458038 GUCD1Q96NT3 240 aa25.62■■□□□ 1.69
CPNE1-220ENST00000458038 DCDC2CA8MYV0 355 aa25.61■■□□□ 1.69
CPNE1-220ENST00000458038 PRDM1O75626 825 aa25.61■■□□□ 1.69
CPNE1-220ENST00000458038 BMP3P12645 472 aa25.61■■□□□ 1.69
CPNE1-220ENST00000458038 ACLYP53396 1101 aa25.61■■□□□ 1.69
CPNE1-220ENST00000458038 C9orf50Q5SZB4 431 aa25.61■■□□□ 1.69
CPNE1-220ENST00000458038 KLHDC9Q8NEP7 349 aa25.61■■□□□ 1.69
CPNE1-220ENST00000458038 CHURC1Q8WUH1 139 aa25.61■■□□□ 1.69
CPNE1-220ENST00000458038 SPC25Q9HBM1 224 aa25.61■■□□□ 1.69
CPNE1-220ENST00000458038 RAVER2Q9HCJ3 691 aaKnown RBP25.61■■□□□ 1.69
CPNE1-220ENST00000458038 SYNRGQ9UMZ2 1314 aa25.61■■□□□ 1.69
CPNE1-220ENST00000458038 RAG1P15918 1043 aa25.6■■□□□ 1.69
CPNE1-220ENST00000458038 SLC4A3P48751 1232 aa25.6■■□□□ 1.69
CPNE1-220ENST00000458038 ACVR2BQ13705 512 aa25.6■■□□□ 1.69
CPNE1-220ENST00000458038 SLFN13Q68D06 897 aa25.6■■□□□ 1.69
CPNE1-220ENST00000458038 PCSK9Q8NBP7 692 aaKnown RBP25.6■■□□□ 1.69
CPNE1-220ENST00000458038 NAPBQ9H115 298 aa25.6■■□□□ 1.69
CPNE1-220ENST00000458038 STARD7Q9NQZ5 370 aa25.6■■□□□ 1.69
CPNE1-220ENST00000458038 TMEM39AQ9NV64 488 aa25.6■■□□□ 1.69
CPNE1-220ENST00000458038 ZHX1Q9UKY1 873 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-220ENST00000458038 MCM3APO60318 1980 aa25.6■■□□□ 1.69
CPNE1-220ENST00000458038 PQBP1O60828 265 aaKnown RBP25.59■■□□□ 1.69
CPNE1-220ENST00000458038 CST5P28325 142 aaPredicted RBP25.59■■□□□ 1.69
CPNE1-220ENST00000458038 FAM160B2Q86V87 743 aa25.59■■□□□ 1.69
CPNE1-220ENST00000458038 ELP1O95163 1332 aa25.59■■□□□ 1.69
CPNE1-220ENST00000458038 MROH7Q68CQ1 1323 aa25.59■■□□□ 1.69
CPNE1-220ENST00000458038 STAT2P52630 851 aa25.58■■□□□ 1.69
CPNE1-220ENST00000458038 TFAP4Q01664 338 aa25.58■■□□□ 1.69
CPNE1-220ENST00000458038 KCNA10Q16322 511 aa25.58■■□□□ 1.69
CPNE1-220ENST00000458038 ZMYM1Q5SVZ6 1142 aa25.58■■□□□ 1.69
CPNE1-220ENST00000458038 CCSAPQ6IQ19 270 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-220ENST00000458038 PI4K2BQ8TCG2 481 aa25.58■■□□□ 1.69
CPNE1-220ENST00000458038 GMCL1Q96IK5 515 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms