RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 PBX1P40424 430 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 PPP1R2P41236 205 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 STAT6P42226 847 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 ADKP55263 362 aaKnown RBP12.36□□□□□ -0.43
RFX3-211ENST00000458034 GNG11P61952 73 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 FAM193AP78312 1265 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 GOLGA8FQ08AF8 430 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 GOLGA8DPQ0D2H9 430 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 GRAPQ13588 217 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 HSP90AA4PQ58FG1 418 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 FBXO38Q6PIJ6 1188 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 DTHD1Q6ZMT9 781 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 GRAPLQ8TC17 118 aaPredicted RBP12.36□□□□□ -0.43
RFX3-211ENST00000458034 CUEDC2Q9H467 287 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.36□□□□□ -0.43
RFX3-211ENST00000458034 SRP68Q9UHB9 627 aaKnown RBP12.36□□□□□ -0.43
RFX3-211ENST00000458034 CCNL1Q9UK58 526 aaPredicted RBP12.36□□□□□ -0.43
RFX3-211ENST00000458034 V9GYY5 206 aaPredicted RBP12.36□□□□□ -0.43
RFX3-211ENST00000458034 IRS2Q9Y4H2 1338 aa12.36□□□□□ -0.43
RFX3-211ENST00000458034 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 DDX60LQ5H9U9 1706 aaKnown RBP12.35□□□□□ -0.43
RFX3-211ENST00000458034 SMIM22K7EJ46 135 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 NMT2O60551 498 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 TADA3O75528 432 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 STX17P56962 302 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 TUBB4BP68371 445 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 ORC2Q13416 577 aaPredicted RBP12.35□□□□□ -0.43
RFX3-211ENST00000458034 WWC2Q6AWC2 1192 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 CREBRFQ8IUR6 639 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 SLF2Q8IX21 1173 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 NOC3LQ8WTT2 800 aaKnown RBP12.35□□□□□ -0.43
RFX3-211ENST00000458034 ANKIB1Q9P2G1 1089 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
RFX3-211ENST00000458034 PARP3Q9Y6F1 533 aa12.35□□□□□ -0.43
RFX3-211ENST00000458034 FOCADQ5VW36 1801 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 WTIPA6NIX2 430 aaPredicted RBP12.34□□□□□ -0.43
RFX3-211ENST00000458034 H7C1D1 291 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 N4BP3O15049 544 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 ATP8B1O43520 1251 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 KIF5CO60282 957 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 TOM1O60784 492 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 FECHP22830 423 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 PRPHP41219 470 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 COPB1P53618 953 aaKnown RBP12.34□□□□□ -0.43
RFX3-211ENST00000458034 KCNB1Q14721 858 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 ERCC6LQ2NKX8 1250 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 ARHGAP29Q52LW3 1261 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 JAKMIP3Q5VZ66 844 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 TMCO3Q6UWJ1 677 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 TOGARAM2Q6ZUX3 1019 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 APTXQ7Z2E3 356 aaKnown RBP12.34□□□□□ -0.43
RFX3-211ENST00000458034 KRT25Q7Z3Z0 450 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 TMTC1Q8IUR5 882 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 RASSF8Q8NHQ8 419 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 NELFBQ8WX92 580 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 AK8Q96MA6 479 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 MED15Q96RN5 788 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 CARD6Q9BX69 1037 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 CCSER1Q9C0I3 900 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 DISC1Q9NRI5 854 aa12.34□□□□□ -0.43
RFX3-211ENST00000458034 BAZ2BQ9UIF8 2168 aaKnown RBP12.33□□□□□ -0.44
RFX3-211ENST00000458034 WNT7AO00755 349 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 ZSCAN20P17040 1043 aaPredicted RBP12.33□□□□□ -0.44
RFX3-211ENST00000458034 ATP2B4P23634 1241 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 SMARCA1P28370 1054 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 TM4SF1P30408 202 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 HOXA7P31268 230 aaPredicted RBP12.33□□□□□ -0.44
RFX3-211ENST00000458034 RFC4P35249 363 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 UBA7P41226 1012 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 MAP3K9P80192 1104 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 PPP2R3AQ06190 1150 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 RBL2Q08999 1139 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 LCE2DQ5TA82 110 aaPredicted RBP12.33□□□□□ -0.44
RFX3-211ENST00000458034 GPR161Q8N6U8 529 aaKnown RBP12.33□□□□□ -0.44
RFX3-211ENST00000458034 SH3RF3Q8TEJ3 882 aaPredicted RBP12.33□□□□□ -0.44
RFX3-211ENST00000458034 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 SPZ1Q9BXG8 430 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 PRDM10Q9NQV6 1147 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 BARHL2Q9NY43 387 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 FAM53CQ9NYF3 392 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 MAGEC2Q9UBF1 373 aaPredicted RBP12.33□□□□□ -0.44
RFX3-211ENST00000458034 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
RFX3-211ENST00000458034 MAD2L2Q9UI95 211 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 MRFAP1Q9Y605 127 aa12.33□□□□□ -0.44
RFX3-211ENST00000458034 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
RFX3-211ENST00000458034 LRRC10BA6NIK2 292 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 KCNJ18B7U540 433 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 hCG_1984214I3L0E3 225 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 STXBP3O00186 592 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 PSMA7O14818 248 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 TEX33O43247 280 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 EEF1GP26641 437 aaKnown RBP12.32□□□□□ -0.44
RFX3-211ENST00000458034 GNA11P29992 359 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 KCNJ12Q14500 433 aa12.32□□□□□ -0.44
RFX3-211ENST00000458034 KRT31Q15323 416 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms