RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 GNL2Q13823 731 aaKnown RBP10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 PKN1Q16512 942 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 MCTP1Q6DN14 999 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 USP48Q86UV5 1035 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 LPAR1Q92633 364 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 MS4A4AQ96JQ5 239 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 ZNF112Q9UJU3 913 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 WDR90Q96KV7 1748 aa10.27□□□□□ -0.76
CDC42EP3-204ENST00000457889 ESYT2A0FGR8 921 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 USP17L5A8MUK1 530 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 EPHX2P34913 555 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 HIRAP54198 1017 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 CCDC96Q2M329 555 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 NOL9Q5SY16 702 aaKnown RBP10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 FOXD4L5Q5VV16 416 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 SLFN13Q68D06 897 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 USP17L2Q6R6M4 530 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 FERMT3Q86UX7 667 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 NOSTRINQ8IVI9 506 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 STAG2Q8N3U4 1231 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 DAGLBQ8NCG7 672 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 FOXD4L4Q8WXT5 416 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 PHF20Q9BVI0 1012 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 GLT8D2Q9H1C3 349 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 BARHL2Q9NY43 387 aa10.27□□□□□ -0.77
CDC42EP3-204ENST00000457889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 PNMA6FA0A0J9YX94 578 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 F5H6K3 240 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 YEATS4O95619 227 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 NDUFB10O96000 172 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 NF2P35240 595 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 KRT2P35908 639 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 TRAPPC10P48553 1259 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 USP14P54578 494 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 DNM1Q05193 864 aaKnown RBP10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 KLRC3Q07444 240 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 KLHL40Q2TBA0 621 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 RILPL1Q5EBL4 403 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 MYSM1Q5VVJ2 828 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 BTNL9Q6UXG8 535 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 MIGA2Q7L4E1 593 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 SIAH1Q8IUQ4 282 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 DIS3L2Q8IYB7 885 aaKnown RBP10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 SCYL3Q8IZE3 742 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 CCDC82Q8N4S0 544 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 BICD2Q8TD16 824 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 MTMR8Q96EF0 704 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 WDR18Q9BV38 432 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 KIAA1683Q9H0B3 1180 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 VCPKMTQ9H867 229 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 AS3MTQ9HBK9 375 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 POLR3EQ9NVU0 708 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 PNMA2Q9UL42 364 aa10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 MORC2Q9Y6X9 1032 aaPredicted RBP10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 ASTN2O75129 1339 aaPredicted RBP10.26□□□□□ -0.77
CDC42EP3-204ENST00000457889 DOCK1Q14185 1865 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 UNCXA6NJT0 531 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 ZBTB5O15062 677 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 CYTH3O43739 400 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 PPP1R12BO60237 982 aaPredicted RBP10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 BMP15O95972 392 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 BMP3P12645 472 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 GNA11P29992 359 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 UBE2HP62256 183 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 GUCY1B3Q02153 619 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 RRP1BQ14684 758 aaKnown RBP10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 NBPF12Q5TAG4 269 aaPredicted RBP10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 MCTP2Q6DN12 878 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 KRT26Q7Z3Y9 468 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 FAM160B2Q86V87 743 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 CLEC10AQ8IUN9 316 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 CMTR1Q8N1G2 835 aaKnown RBP10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 JMYQ8N9B5 988 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 KCNG4Q8TDN1 519 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 CHURC1Q8WUH1 139 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 SPATA32Q96LK8 384 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 AIFM3Q96NN9 605 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 TAF1DQ9H5J8 278 aaPredicted RBP10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 PICK1Q9NRD5 415 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 LMBRD1Q9NUN5 540 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 RTEL1Q9NZ71 1219 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 MYH15Q9Y2K3 1946 aa10.25□□□□□ -0.77
CDC42EP3-204ENST00000457889 ATAD5Q96QE3 1844 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 STXBP3O00186 592 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 WDR46O15213 610 aaKnown RBP10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 FIBPO43427 364 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 TRAK2O60296 914 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 PPFIA3O75145 1194 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 GOLGA8HP0CJ92 632 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 FDX1P10109 184 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 NASPP49321 788 aaPredicted RBP10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 STAT2P52630 851 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 NLRP5P59047 1200 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 NBR1Q14596 966 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 HEATR3Q7Z4Q2 680 aa10.24□□□□□ -0.77
CDC42EP3-204ENST00000457889 RBM46Q8TBY0 533 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms