RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SRGNP10124 158 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 RPL13P26373 211 aaKnown RBP7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 TUBB8Q3ZCM7 444 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 NUGGCQ68CJ6 796 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 MTHFD1LQ6UB35 978 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 NYAP1Q6ZVC0 841 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 DEFB132Q7Z7B7 95 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 APPBP2Q92624 585 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 ZKSCAN4Q969J2 545 aaPredicted RBP7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 OSBP2Q969R2 916 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 DHRS1Q96LJ7 313 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 SEC62Q99442 399 aaKnown RBP7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 JPH2Q9BR39 696 aaPredicted RBP7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 DSCC1Q9BVC3 393 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 TM6SF1Q9BZW5 370 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 GPCPD1Q9NPB8 672 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 DDX25Q9UHL0 483 aaKnown RBP7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 ZNF215Q9UL58 517 aaPredicted RBP7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 RBM8AQ9Y5S9 174 aaKnown RBP7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 PARP3Q9Y6F1 533 aa7.68□□□□□ -1.18
CUBNP3-201ENST00000457461 SNED1Q8TER0 1413 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 BRCA1P38398 1863 aaKnown RBP7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 M0R2C6 588 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 FOXP2O15409 715 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 PRPF40AO75400 957 aaKnown RBP7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 FSBPO95073 299 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 VIL1P09327 827 aaKnown RBP7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 NPR1P16066 1061 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 KLRK1P26718 216 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 OAS2P29728 719 aaKnown RBP7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 PDE6BP35913 854 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 ZBED6P86452 979 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 ZSCAN25Q6NSZ9 544 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 CHRDL2Q6WN34 429 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 RSPH3Q86UC2 560 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 KCNN1Q92952 543 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 MRFAP1L1Q96HT8 127 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 RSRC1Q96IZ7 334 aaKnown RBP7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 SGIP1Q9BQI5 828 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 MMADHCQ9H3L0 296 aaPredicted RBP7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 KCNF1Q9H3M0 494 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 HOXC10Q9NYD6 342 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 TIAM2Q8IVF5 1701 aa7.67□□□□□ -1.18
CUBNP3-201ENST00000457461 PYGLP06737 847 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 PDE6AP16499 860 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 SLC8A1P32418 973 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 GYG1P46976 350 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 KCNJ6P48051 423 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 LMAN1P49257 510 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 USP11P51784 963 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 MAP3K9P80192 1104 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 LRRC23Q53EV4 343 aaPredicted RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CCDC93Q567U6 631 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CAVIN4Q5BKX8 364 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CREB3L3Q68CJ9 461 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 SLC30A9Q6PML9 568 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CPLX2Q6PUV4 134 aaKnown RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CCDC129Q6ZRS4 1044 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 SLC51AQ86UW1 340 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 SP8Q8IXZ3 490 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 PIP4P2Q8N4L2 257 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CCDC150Q8NCX0 1101 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 SLC16A10Q8TF71 515 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 GIMAP1Q8WWP7 306 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 GTF3C6Q969F1 213 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 DHTKD1Q96HY7 919 aaPredicted RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 SPATA32Q96LK8 384 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 TTC14Q96N46 770 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 SCLT1Q96NL6 688 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 TSGA10Q9BZW7 698 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 TMEM63CQ9P1W3 806 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 DENND2AQ9ULE3 1009 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CORO1CQ9ULV4 474 aaPredicted RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 PYCARDQ9ULZ3 195 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CDK5RAP2Q96SN8 1893 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 ZMYM6O95789 1325 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 SALL1Q9NSC2 1324 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 PSME4Q14997 1843 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 EME2A4GXA9 379 aaPredicted RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 TMEM232C9JQI7 657 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 ST18O60284 1047 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 ZBED4O75132 1171 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 MSL3P1P0C860 447 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 HSPD1P10809 573 aaKnown RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 EZRP15311 586 aaKnown RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 XBP1P17861 261 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CYP11B2P19099 503 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 ATP2B4P23634 1241 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 HOXD10P28358 340 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 HIBADHP31937 336 aaKnown RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 MCM2P49736 904 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 GPSM2P81274 684 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 CCDC92Q53HC0 331 aaPredicted RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 MSL1Q68DK7 614 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 YTHDF3Q7Z739 585 aaKnown RBP7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 TXNRD3Q86VQ6 643 aa7.66□□□□□ -1.18
CUBNP3-201ENST00000457461 PDILTQ8N807 584 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms