RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 USP17L1Q7RTZ2 530 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 KSR1Q8IVT5 923 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 GOLGA5Q8TBA6 731 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 LRRC27Q9C0I9 530 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 NKIRAS1Q9NYS0 192 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 STK38LQ9Y2H1 464 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 KRT2P35908 639 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 TUBB2AQ13885 445 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 DAAM2Q86T65 1068 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 HOMEZQ8IX15 550 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 CCDC26Q8TAB7 109 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 MRFAP1L1Q96HT8 127 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 TUBB2BQ9BVA1 445 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 SH2D4AQ9H788 454 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 IVNS1ABPQ9Y6Y0 642 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 V9GY48 417 aaPredicted RBP10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 RPSAP08865 295 aaKnown RBP10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 ZNF853P0CG23 659 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 ZAP70P43403 619 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 ATP11AP98196 1134 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 PDE4DQ08499 809 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 AKNAD1Q5T1N1 836 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 KRT40Q6A162 431 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 TGFBRAP1Q8WUH2 860 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 IFT74Q96LB3 600 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 KCNJ14Q9UNX9 436 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 JRKLQ9Y4A0 524 aa10.83□□□□□ -0.68
MSC-AS1-201ENST00000457356 USP17L8P0C7I0 530 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 ALDH3A1P30838 453 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 PTPROQ16827 1216 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 SUPT20HL1Q3ZLR7 823 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 DCAF17Q5H9S7 520 aaPredicted RBP10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 RUFY4Q6ZNE9 571 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 CCDC50Q8IVM0 306 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 MYO5BQ9ULV0 1848 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 GYS1P13807 737 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 LONRF2Q1L5Z9 754 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 ADALQ6DHV7 355 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 ANKRD13CQ8N6S4 541 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 STMN2Q93045 179 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 LLPHQ9BRT6 129 aaKnown RBP10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 ATP2A1O14983 1001 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 PRDM1O75626 825 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 CLTAP09496 248 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 POSTNQ15063 836 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 LETM2Q2VYF4 491 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 MYSM1Q5VVJ2 828 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 PTF1AQ7RTS3 328 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 LMNTD2Q8IXW0 634 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 ARHGEF2Q92974 986 aaKnown RBP10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 MPHOSPH6Q99547 160 aaKnown RBP10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 ARMT1Q9H993 441 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 NLRC4Q9NPP4 1024 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 SYNRGQ9UMZ2 1314 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 MEGF6O75095 1541 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 A6NNZ2 444 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 NEDD9Q14511 834 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 E2F5Q15329 346 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 TUBB8Q3ZCM7 444 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 SLC9C1Q4G0N8 1177 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 ICE2Q659A1 982 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 LRRC45Q96CN5 670 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 FHDC1Q9C0D6 1143 aaPredicted RBP10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 BLZF1Q9H2G9 400 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 FAM204AQ9H8W3 233 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 FAM207AQ9NSI2 230 aaPredicted RBP10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 FAN1Q9Y2M0 1017 aa10.82□□□□□ -0.68
MSC-AS1-201ENST00000457356 CUTAO60888 179 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 CAMTA2O94983 1202 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 CALML3P27482 149 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 PRPHP41219 470 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 ARID5BQ14865 1188 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 STXBP4Q6ZWJ1 553 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 CAPS2Q9BXY5 557 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 BSDC1Q9NW68 430 aaPredicted RBP10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 SERTAD1Q9UHV2 236 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 PFKFB1P16118 471 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 CLCN6P51797 869 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 ADCK5Q3MIX3 580 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 COA1Q9GZY4 146 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 ANGEL1Q9UNK9 670 aaKnown RBP10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 ENC1O14682 589 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 PHKA1P46020 1223 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 PAK1Q13153 545 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 DIXDC1Q155Q3 683 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 MGARPQ8TDB4 240 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 TRIM7Q9C029 511 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 ARHGEF10LQ9HCE6 1279 aa10.81□□□□□ -0.68
MSC-AS1-201ENST00000457356 MKRN3Q13064 507 aaKnown RBP10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 UAP1Q16222 522 aaPredicted RBP10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 CCDC38Q502W7 563 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 PIK3AP1Q6ZUJ8 805 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 ARMC9Q7Z3E5 817 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 UHMK1Q8TAS1 419 aaKnown RBP10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 CCDC97Q96F63 343 aaPredicted RBP10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 NOX5Q96PH1 765 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 PCDHA7Q9UN72 937 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 TNS2Q63HR2 1409 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms