RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FBXO28Q9NVF7 368 aa11.81□□□□□ -0.52
ATG4A-206ENST00000457035 SNX14Q9Y5W7 946 aa11.81□□□□□ -0.52
ATG4A-206ENST00000457035 IFIT3O14879 490 aaKnown RBP11.8□□□□□ -0.52
ATG4A-206ENST00000457035 CNMDO75829 334 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 FLOT1O75955 427 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 SNHG28P0DPA3 235 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 BMP3P12645 472 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 CTGFP29279 349 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 MCM5P33992 734 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 SLC1A4P43007 532 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
ATG4A-206ENST00000457035 KRT32Q14532 448 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 FAM110CQ1W6H9 321 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 GTF3C2Q8WUA4 911 aaPredicted RBP11.8□□□□□ -0.52
ATG4A-206ENST00000457035 UBAC1Q9BSL1 405 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 MORF4L1Q9UBU8 362 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 ZSWIM8A7E2V4 1837 aa11.8□□□□□ -0.52
ATG4A-206ENST00000457035 RBBP6Q7Z6E9 1792 aaKnown RBP11.79□□□□□ -0.52
ATG4A-206ENST00000457035 TMEM232C9JQI7 657 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 PRC1O43663 620 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 PLA2G6O60733 806 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 PDHBP11177 359 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
ATG4A-206ENST00000457035 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
ATG4A-206ENST00000457035 IFIT1BQ5T764 474 aaKnown RBP11.79□□□□□ -0.52
ATG4A-206ENST00000457035 KCTD1Q719H9 257 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 DHX32Q7L7V1 743 aaKnown RBP11.79□□□□□ -0.52
ATG4A-206ENST00000457035 RASGRP2Q7LDG7 609 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 PRPF38AQ8NAV1 312 aaKnown RBP11.79□□□□□ -0.52
ATG4A-206ENST00000457035 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 GPRC5AQ8NFJ5 357 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 CD99L2Q8TCZ2 262 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 DCAF4Q8WV16 495 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 RNF25Q96BH1 459 aaPredicted RBP11.79□□□□□ -0.52
ATG4A-206ENST00000457035 CHMP4CQ96CF2 233 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 ATG4CQ96DT6 458 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 GPHNQ9NQX3 736 aaPredicted RBP11.79□□□□□ -0.52
ATG4A-206ENST00000457035 BTBD7Q9P203 1132 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 PPP1R9AQ9ULJ8 1098 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 RABGAP1Q9Y3P9 1069 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 MYH6P13533 1939 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 MYPNQ86TC9 1320 aa11.79□□□□□ -0.52
ATG4A-206ENST00000457035 VWA5AO00534 786 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 RIOK3O14730 519 aaKnown RBP11.78□□□□□ -0.52
ATG4A-206ENST00000457035 EIF5BO60841 1220 aaKnown RBP11.78□□□□□ -0.52
ATG4A-206ENST00000457035 ERVK-9P63128 1117 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 ERVK-24P63145 666 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 WTAPQ15007 396 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 SART3Q15020 963 aaKnown RBP11.78□□□□□ -0.52
ATG4A-206ENST00000457035 TMEM67Q5HYA8 995 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 TTBK2Q6IQ55 1244 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 BTNL9Q6UXG8 535 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 MB21D1Q8N884 522 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 REPS2Q8NFH8 660 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 CHURC1Q8WUH1 139 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 ERO1AQ96HE7 468 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 TMEM87BQ96K49 555 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 SLF1Q9BQI6 1058 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 LRRC2Q9BYS8 371 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 KAT14Q9H8E8 782 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 WDR19Q8NEZ3 1342 aa11.78□□□□□ -0.52
ATG4A-206ENST00000457035 ERICH2A1L162 156 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.53
ATG4A-206ENST00000457035 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
ATG4A-206ENST00000457035 CPA1P15085 419 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 LIFRP42702 1097 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 PSMC4P43686 418 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 STAT2P52630 851 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 ZNF543Q08ER8 600 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 TROAPQ12815 778 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 TMEM132BQ14DG7 1078 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 FBXO46Q6PJ61 603 aaPredicted RBP11.77□□□□□ -0.53
ATG4A-206ENST00000457035 TMTC2Q8N394 836 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 IL17RAQ96F46 866 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 TRIM47Q96LD4 638 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 JAKMIP1Q96N16 626 aaKnown RBP11.77□□□□□ -0.53
ATG4A-206ENST00000457035 PAGR1Q9BTK6 254 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 A0A0G2JMZ2 1700 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 CENPFP49454 3210 aa11.77□□□□□ -0.53
ATG4A-206ENST00000457035 PSMA5P28066 241 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 MAMSTRQ6ZN01 415 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 OTOP1Q7RTM1 612 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 FAM160B2Q86V87 743 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 KIFC2Q96AC6 838 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 TM6SF1Q9BZW5 370 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 PORCNQ9H237 461 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 EFCC1Q9HA90 598 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 SLC38A10Q9HBR0 1119 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 ZNF214Q9UL59 606 aaPredicted RBP11.76□□□□□ -0.53
ATG4A-206ENST00000457035 PRR12Q9ULL5 1215 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 TRIM17Q9Y577 477 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms