RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 CRISPLD2Q9H0B8 497 aa19.16■□□□□ 0.66
CPSF6-203ENST00000456847 PCP11498 1178 aaKnown RBP19.15■□□□□ 0.66
CPSF6-203ENST00000456847 CCND3P30281 292 aaPredicted RBP19.15■□□□□ 0.66
CPSF6-203ENST00000456847 SNRNP48Q6IEG0 339 aaKnown RBP19.15■□□□□ 0.66
CPSF6-203ENST00000456847 ABRAQ8N0Z2 381 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 CPXCR1Q8N123 301 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 TEX13BQ9BXU2 312 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 TMEM232C9JQI7 657 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 MCCP23508 829 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 STAT2P52630 851 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 KCTD2Q14681 263 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 GMCL1Q96IK5 515 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 HTATIP2Q9BUP3 242 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 DSCC1Q9BVC3 393 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 NBPF3Q9H094 633 aa19.15■□□□□ 0.66
CPSF6-203ENST00000456847 BRCA2P51587 3418 aa19.14■□□□□ 0.66
CPSF6-203ENST00000456847 CCDC96Q2M329 555 aa19.14■□□□□ 0.65
CPSF6-203ENST00000456847 RAD50Q92878 1312 aa19.14■□□□□ 0.65
CPSF6-203ENST00000456847 COBLO75128 1261 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 CNGA1P29973 690 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 CYP2C19P33261 490 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 FAM160B2Q86V87 743 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 CHURC1Q8WUH1 139 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 RUFY2Q8WXA3 655 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 DPF3Q92784 378 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 RAVER2Q9HCJ3 691 aaKnown RBP19.13■□□□□ 0.65
CPSF6-203ENST00000456847 CTNNA3Q9UI47 895 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 NEDD4P46934 1319 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 IMMTQ16891 758 aaKnown RBP19.13■□□□□ 0.65
CPSF6-203ENST00000456847 OLFML2BQ68BL8 750 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 KCTD1Q719H9 257 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 UBE2Q1Q7Z7E8 422 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 ANKLE1Q8NAG6 615 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 ESR2Q92731 530 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 SLC38A10Q9HBR0 1119 aa19.13■□□□□ 0.65
CPSF6-203ENST00000456847 TOP1P11387 765 aaKnown RBP19.12■□□□□ 0.65
CPSF6-203ENST00000456847 RASGRP2Q7LDG7 609 aa19.12■□□□□ 0.65
CPSF6-203ENST00000456847 TCP11L1Q9NUJ3 509 aa19.12■□□□□ 0.65
CPSF6-203ENST00000456847 RCSD1Q6JBY9 416 aa19.12■□□□□ 0.65
CPSF6-203ENST00000456847 DIS3LQ8TF46 1054 aaKnown RBP19.12■□□□□ 0.65
CPSF6-203ENST00000456847 DCAF4Q8WV16 495 aa19.12■□□□□ 0.65
CPSF6-203ENST00000456847 PAWRQ96IZ0 340 aaKnown RBP19.12■□□□□ 0.65
CPSF6-203ENST00000456847 PGK2P07205 417 aa19.11■□□□□ 0.65
CPSF6-203ENST00000456847 FDX1P10109 184 aa19.11■□□□□ 0.65
CPSF6-203ENST00000456847 NECAB2Q7Z6G3 386 aa19.11■□□□□ 0.65
CPSF6-203ENST00000456847 MAML3Q96JK9 1138 aa19.11■□□□□ 0.65
CPSF6-203ENST00000456847 TMEM47Q9BQJ4 181 aa19.11■□□□□ 0.65
CPSF6-203ENST00000456847 IL25Q9H293 177 aa19.11■□□□□ 0.65
CPSF6-203ENST00000456847 OGDHLQ9ULD0 1010 aa19.11■□□□□ 0.65
CPSF6-203ENST00000456847 ATP2A1O14983 1001 aa19.1■□□□□ 0.65
CPSF6-203ENST00000456847 CHMLP26374 656 aa19.1■□□□□ 0.65
CPSF6-203ENST00000456847 NOVP48745 357 aa19.1■□□□□ 0.65
CPSF6-203ENST00000456847 OAZ1P54368 228 aa19.1■□□□□ 0.65
CPSF6-203ENST00000456847 RIPK3Q9Y572 518 aa19.1■□□□□ 0.65
CPSF6-203ENST00000456847 DDX11Q96FC9 970 aa19.1■□□□□ 0.65
CPSF6-203ENST00000456847 ZKSCAN3Q9BRR0 538 aa19.1■□□□□ 0.65
CPSF6-203ENST00000456847 B4E1Z4 1266 aa19.09■□□□□ 0.65
CPSF6-203ENST00000456847 KDM4AO75164 1064 aa19.09■□□□□ 0.65
CPSF6-203ENST00000456847 CYBAP13498 195 aa19.09■□□□□ 0.65
CPSF6-203ENST00000456847 CENPQQ7L2Z9 268 aaPredicted RBP19.09■□□□□ 0.65
CPSF6-203ENST00000456847 IQCA1Q86XH1 822 aa19.09■□□□□ 0.65
CPSF6-203ENST00000456847 HOMER2Q9NSB8 354 aa19.09■□□□□ 0.65
CPSF6-203ENST00000456847 DDX20Q9UHI6 824 aaKnown RBP19.09■□□□□ 0.65
CPSF6-203ENST00000456847 FRMPD2Q68DX3 1309 aaPredicted RBP19.09■□□□□ 0.65
CPSF6-203ENST00000456847 ALPK3Q96L96 1907 aa19.08■□□□□ 0.65
CPSF6-203ENST00000456847 MSCO60682 206 aa19.08■□□□□ 0.65
CPSF6-203ENST00000456847 NT5C2P49902 561 aa19.08■□□□□ 0.65
CPSF6-203ENST00000456847 CCDC174Q6PII3 467 aa19.08■□□□□ 0.65
CPSF6-203ENST00000456847 TRPV1Q8NER1 839 aa19.08■□□□□ 0.65
CPSF6-203ENST00000456847 TTC14Q96N46 770 aa19.08■□□□□ 0.65
CPSF6-203ENST00000456847 FBXO40Q9UH90 709 aa19.08■□□□□ 0.65
CPSF6-203ENST00000456847 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.65
CPSF6-203ENST00000456847 PLA2G6O60733 806 aa19.08■□□□□ 0.64
CPSF6-203ENST00000456847 LHX8Q68G74 356 aa19.08■□□□□ 0.64
CPSF6-203ENST00000456847 ANKRD35Q8N283 1001 aa19.08■□□□□ 0.64
CPSF6-203ENST00000456847 CHST13Q8NET6 341 aa19.08■□□□□ 0.64
CPSF6-203ENST00000456847 KRT23Q9C075 422 aa19.08■□□□□ 0.64
CPSF6-203ENST00000456847 C11orf49Q9H6J7 331 aa19.08■□□□□ 0.64
CPSF6-203ENST00000456847 GPCPD1Q9NPB8 672 aa19.08■□□□□ 0.64
CPSF6-203ENST00000456847 SNAP25P60880 206 aa19.07■□□□□ 0.64
CPSF6-203ENST00000456847 ZNF792Q3KQV3 632 aa19.07■□□□□ 0.64
CPSF6-203ENST00000456847 CCDC178Q5BJE1 867 aa19.07■□□□□ 0.64
CPSF6-203ENST00000456847 CNNM2Q9H8M5 875 aa19.07■□□□□ 0.64
CPSF6-203ENST00000456847 DIS3Q9Y2L1 958 aaKnown RBP19.07■□□□□ 0.64
CPSF6-203ENST00000456847 PRAMEF19Q5SWL8 479 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 ACAD9Q9H845 621 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 RNF146Q9NTX7 359 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 H0YGN5 161 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 EVI5O60447 810 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 IGHA2P01877 340 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 PDHBP11177 359 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 ALAS1P13196 640 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 SLC16A2P36021 539 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 SYDE2Q5VT97 1194 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 TTBK2Q6IQ55 1244 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 AGBL1Q96MI9 1066 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 TINF2Q9BSI4 451 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 NR2E3Q9Y5X4 410 aa19.06■□□□□ 0.64
CPSF6-203ENST00000456847 MKI67P46013 3256 aaKnown RBP19.05■□□□□ 0.64
CPSF6-203ENST00000456847 ANO1Q5XXA6 986 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms