RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.46
TOP3B-212ENST00000456075 DPP9Q86TI2 863 aa12.15□□□□□ -0.46
TOP3B-212ENST00000456075 CPXCR1Q8N123 301 aa12.15□□□□□ -0.46
TOP3B-212ENST00000456075 NCOA7Q8NI08 942 aa12.15□□□□□ -0.46
TOP3B-212ENST00000456075 APBA2Q99767 749 aa12.15□□□□□ -0.46
TOP3B-212ENST00000456075 SLC5A4Q9NY91 659 aa12.15□□□□□ -0.46
TOP3B-212ENST00000456075 ZSWIM5Q9P217 1185 aa12.15□□□□□ -0.46
TOP3B-212ENST00000456075 TNKSO95271 1327 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 HMGCRP04035 888 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 XRCC5P13010 732 aaKnown RBP12.14□□□□□ -0.47
TOP3B-212ENST00000456075 NOVP48745 357 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 KCTD2Q14681 263 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
TOP3B-212ENST00000456075 RIOX2Q8IUF8 465 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 LSG1Q9H089 658 aaKnown RBP12.14□□□□□ -0.47
TOP3B-212ENST00000456075 RNF208Q9H0X6 261 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 GJD2Q9UKL4 321 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 ADAMTS5Q9UNA0 930 aa12.14□□□□□ -0.47
TOP3B-212ENST00000456075 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
TOP3B-212ENST00000456075 E7EWF7 191 aa12.13□□□□□ -0.47
TOP3B-212ENST00000456075 IFIT3O14879 490 aaKnown RBP12.13□□□□□ -0.47
TOP3B-212ENST00000456075 CCL5P13501 91 aa12.13□□□□□ -0.47
TOP3B-212ENST00000456075 ADORA2AP29274 412 aa12.13□□□□□ -0.47
TOP3B-212ENST00000456075 GRB14Q14449 540 aa12.13□□□□□ -0.47
TOP3B-212ENST00000456075 MORN1Q5T089 497 aa12.13□□□□□ -0.47
TOP3B-212ENST00000456075 ENAHQ8N8S7 591 aaPredicted RBP12.13□□□□□ -0.47
TOP3B-212ENST00000456075 MMP19Q99542 508 aa12.13□□□□□ -0.47
TOP3B-212ENST00000456075 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
TOP3B-212ENST00000456075 RAVER2Q9HCJ3 691 aaKnown RBP12.13□□□□□ -0.47
TOP3B-212ENST00000456075 ZNF214Q9UL59 606 aaPredicted RBP12.13□□□□□ -0.47
TOP3B-212ENST00000456075 A0A0G2JMZ2 1700 aa12.13□□□□□ -0.47
TOP3B-212ENST00000456075 SLC27A2O14975 620 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
TOP3B-212ENST00000456075 PLA2G6O60733 806 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 PDHBP11177 359 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 SLC16A2P36021 539 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 OAZ1P54368 228 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 MTFR1Q15390 333 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 GPATCH4Q5T3I0 446 aaKnown RBP12.12□□□□□ -0.47
TOP3B-212ENST00000456075 SYDE2Q5VT97 1194 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 CREB3L3Q68CJ9 461 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 CCDC174Q6PII3 467 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 ABRAQ8N0Z2 381 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 NKX2-3Q8TAU0 364 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 DDX11Q96FC9 970 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 HOMER2Q9NSB8 354 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 FBXO40Q9UH90 709 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 PRR12Q9ULL5 1215 aa12.12□□□□□ -0.47
TOP3B-212ENST00000456075 ATP2A1O14983 1001 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 REC8O95072 547 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 PARP1P09874 1014 aaKnown RBP12.11□□□□□ -0.47
TOP3B-212ENST00000456075 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
TOP3B-212ENST00000456075 MLLT1Q03111 559 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-212ENST00000456075 ZNF543Q08ER8 600 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 WTAPQ15007 396 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 TMEM67Q5HYA8 995 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 CYB5R4Q7L1T6 521 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 ANKRD35Q8N283 1001 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 REPS2Q8NFH8 660 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 TRIB2Q92519 343 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 USP6NLQ92738 828 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 UNC93B1Q9H1C4 597 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-212ENST00000456075 RLFQ13129 1914 aa12.11□□□□□ -0.47
TOP3B-212ENST00000456075 POTEFA5A3E0 1075 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 HOXC6P09630 235 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 GOLGA8HP0CJ92 632 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 MCM5P33992 734 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 CCL14Q16627 93 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 CHST3Q7LGC8 479 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 CATIPQ7Z7H3 387 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 CHST13Q8NET6 341 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 PNMA2Q9UL42 364 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 CCPG1Q9ULG6 757 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 TAF6LQ9Y6J9 622 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
TOP3B-212ENST00000456075 PARP14Q460N5 1801 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 PRC1O43663 620 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 GJB1P08034 283 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 SNHG28P0DPA3 235 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 ALAS1P13196 640 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 EN2P19622 333 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-212ENST00000456075 SNAP25P60880 206 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 KRT32Q14532 448 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 TKFCQ3LXA3 575 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 BTNL9Q6UXG8 535 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 STOX1Q6ZVD7 989 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 AGBL1Q96MI9 1066 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 DEFB118Q96PH6 123 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms