RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 MSCO60682 206 aa20.96■□□□□ 0.95
COL13A1-206ENST00000456019 CNGA1P29973 690 aa20.96■□□□□ 0.95
COL13A1-206ENST00000456019 IRX6P78412 446 aaPredicted RBP20.96■□□□□ 0.95
COL13A1-206ENST00000456019 SNRNP48Q6IEG0 339 aaKnown RBP20.96■□□□□ 0.95
COL13A1-206ENST00000456019 KIFC2Q96AC6 838 aa20.96■□□□□ 0.95
COL13A1-206ENST00000456019 GMCL1Q96IK5 515 aa20.96■□□□□ 0.95
COL13A1-206ENST00000456019 C11orf49Q9H6J7 331 aa20.96■□□□□ 0.95
COL13A1-206ENST00000456019 IL17RBQ9NRM6 502 aa20.96■□□□□ 0.95
COL13A1-206ENST00000456019 TOMM22Q9NS69 142 aa20.96■□□□□ 0.95
COL13A1-206ENST00000456019 DDX20Q9UHI6 824 aaKnown RBP20.96■□□□□ 0.95
COL13A1-206ENST00000456019 TACC3Q9Y6A5 838 aa20.96■□□□□ 0.95
COL13A1-206ENST00000456019 EVI5O60447 810 aa20.95■□□□□ 0.94
COL13A1-206ENST00000456019 CYBAP13498 195 aa20.95■□□□□ 0.94
COL13A1-206ENST00000456019 MAML3Q96JK9 1138 aa20.95■□□□□ 0.94
COL13A1-206ENST00000456019 SLC38A10Q9HBR0 1119 aa20.95■□□□□ 0.94
COL13A1-206ENST00000456019 ISY1Q9ULR0 285 aaKnown RBP20.95■□□□□ 0.94
COL13A1-206ENST00000456019 NMT2O60551 498 aa20.94■□□□□ 0.94
COL13A1-206ENST00000456019 SLC34A2O95436 690 aa20.94■□□□□ 0.94
COL13A1-206ENST00000456019 FDX1P10109 184 aa20.94■□□□□ 0.94
COL13A1-206ENST00000456019 SLC1A4P43007 532 aa20.94■□□□□ 0.94
COL13A1-206ENST00000456019 RRP12Q5JTH9 1297 aaKnown RBP20.94■□□□□ 0.94
COL13A1-206ENST00000456019 CWC27Q6UX04 472 aaKnown RBP20.94■□□□□ 0.94
COL13A1-206ENST00000456019 TRPV1Q8NER1 839 aa20.94■□□□□ 0.94
COL13A1-206ENST00000456019 CHURC1Q8WUH1 139 aa20.94■□□□□ 0.94
COL13A1-206ENST00000456019 DIS3Q9Y2L1 958 aaKnown RBP20.94■□□□□ 0.94
COL13A1-206ENST00000456019 TMEM232C9JQI7 657 aa20.93■□□□□ 0.94
COL13A1-206ENST00000456019 PCP11498 1178 aaKnown RBP20.93■□□□□ 0.94
COL13A1-206ENST00000456019 MCCP23508 829 aa20.93■□□□□ 0.94
COL13A1-206ENST00000456019 NOVP48745 357 aa20.93■□□□□ 0.94
COL13A1-206ENST00000456019 STAT2P52630 851 aa20.93■□□□□ 0.94
COL13A1-206ENST00000456019 OAZ1P54368 228 aa20.93■□□□□ 0.94
COL13A1-206ENST00000456019 HAND2P61296 217 aa20.93■□□□□ 0.94
COL13A1-206ENST00000456019 HABP4Q5JVS0 413 aaKnown RBP20.93■□□□□ 0.94
COL13A1-206ENST00000456019 FAM160B2Q86V87 743 aa20.93■□□□□ 0.94
COL13A1-206ENST00000456019 CPXCR1Q8N123 301 aa20.93■□□□□ 0.94
COL13A1-206ENST00000456019 STAG1Q8WVM7 1258 aa20.93■□□□□ 0.94
COL13A1-206ENST00000456019 PGK2P07205 417 aa20.92■□□□□ 0.94
COL13A1-206ENST00000456019 ZNF792Q3KQV3 632 aa20.92■□□□□ 0.94
COL13A1-206ENST00000456019 AKNAD1Q5T1N1 836 aa20.92■□□□□ 0.94
COL13A1-206ENST00000456019 MFSD6Q6ZSS7 791 aa20.92■□□□□ 0.94
COL13A1-206ENST00000456019 RNF41Q9H4P4 317 aaPredicted RBP20.92■□□□□ 0.94
COL13A1-206ENST00000456019 RAVER2Q9HCJ3 691 aaKnown RBP20.92■□□□□ 0.94
COL13A1-206ENST00000456019 TCP11L1Q9NUJ3 509 aa20.92■□□□□ 0.94
COL13A1-206ENST00000456019 RIPK3Q9Y572 518 aa20.92■□□□□ 0.94
COL13A1-206ENST00000456019 PLA2G6O60733 806 aa20.91■□□□□ 0.94
COL13A1-206ENST00000456019 COL6A1P12109 1028 aa20.91■□□□□ 0.94
COL13A1-206ENST00000456019 PDE4AP27815 886 aa20.91■□□□□ 0.94
COL13A1-206ENST00000456019 SLC4A3P48751 1232 aa20.91■□□□□ 0.94
COL13A1-206ENST00000456019 IKQ13123 557 aaPredicted RBP20.91■□□□□ 0.94
COL13A1-206ENST00000456019 RCSD1Q6JBY9 416 aa20.91■□□□□ 0.94
COL13A1-206ENST00000456019 NRBP1Q9UHY1 535 aa20.91■□□□□ 0.94
COL13A1-206ENST00000456019 COLQQ9Y215 455 aaPredicted RBP20.91■□□□□ 0.94
COL13A1-206ENST00000456019 PFASO15067 1338 aa20.9■□□□□ 0.94
COL13A1-206ENST00000456019 ZNF213O14771 459 aa20.9■□□□□ 0.94
COL13A1-206ENST00000456019 SEPT4O43236 478 aa20.9■□□□□ 0.94
COL13A1-206ENST00000456019 TTC22Q5TAA0 569 aa20.9■□□□□ 0.94
COL13A1-206ENST00000456019 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.9■□□□□ 0.94
COL13A1-206ENST00000456019 CHMP4CQ96CF2 233 aa20.9■□□□□ 0.94
COL13A1-206ENST00000456019 DDX11Q96FC9 970 aa20.9■□□□□ 0.94
COL13A1-206ENST00000456019 TINF2Q9BSI4 451 aa20.9■□□□□ 0.94
COL13A1-206ENST00000456019 FBXO40Q9UH90 709 aa20.9■□□□□ 0.94
COL13A1-206ENST00000456019 TOP1P11387 765 aaKnown RBP20.89■□□□□ 0.93
COL13A1-206ENST00000456019 CHRDL2Q6WN34 429 aa20.89■□□□□ 0.93
COL13A1-206ENST00000456019 KCTD1Q719H9 257 aa20.89■□□□□ 0.93
COL13A1-206ENST00000456019 TBC1D10CQ8IV04 446 aa20.89■□□□□ 0.93
COL13A1-206ENST00000456019 CHST13Q8NET6 341 aa20.89■□□□□ 0.93
COL13A1-206ENST00000456019 DCAF4Q8WV16 495 aa20.89■□□□□ 0.93
COL13A1-206ENST00000456019 DSCC1Q9BVC3 393 aa20.89■□□□□ 0.93
COL13A1-206ENST00000456019 FRMPD3Q5JV73 1810 aa20.89■□□□□ 0.93
COL13A1-206ENST00000456019 ZNFX1Q9P2E3 1918 aaKnown RBP20.88■□□□□ 0.93
COL13A1-206ENST00000456019 NT5C2P49902 561 aa20.88■□□□□ 0.93
COL13A1-206ENST00000456019 PRAMEF19Q5SWL8 479 aa20.88■□□□□ 0.93
COL13A1-206ENST00000456019 C7orf61Q8IZ16 206 aa20.88■□□□□ 0.93
COL13A1-206ENST00000456019 MSL3Q8N5Y2 521 aaKnown RBP20.88■□□□□ 0.93
COL13A1-206ENST00000456019 TMEM47Q9BQJ4 181 aa20.88■□□□□ 0.93
COL13A1-206ENST00000456019 MTMR7Q9Y216 660 aa20.88■□□□□ 0.93
COL13A1-206ENST00000456019 DNAJC25-GNG10A0A024R161 153 aa20.87■□□□□ 0.93
COL13A1-206ENST00000456019 DNM1LO00429 736 aa20.87■□□□□ 0.93
COL13A1-206ENST00000456019 GSPT1P15170 499 aaKnown RBP20.87■□□□□ 0.93
COL13A1-206ENST00000456019 CCDC96Q2M329 555 aa20.87■□□□□ 0.93
COL13A1-206ENST00000456019 ANKRD35Q8N283 1001 aa20.87■□□□□ 0.93
COL13A1-206ENST00000456019 ARRDC4Q8NCT1 418 aa20.87■□□□□ 0.93
COL13A1-206ENST00000456019 ESR2Q92731 530 aa20.87■□□□□ 0.93
COL13A1-206ENST00000456019 TTC14Q96N46 770 aa20.87■□□□□ 0.93
COL13A1-206ENST00000456019 CTNNA3Q9UI47 895 aa20.87■□□□□ 0.93
COL13A1-206ENST00000456019 ALPK3Q96L96 1907 aa20.86■□□□□ 0.93
COL13A1-206ENST00000456019 TKFCQ3LXA3 575 aa20.86■□□□□ 0.93
COL13A1-206ENST00000456019 RASGRP2Q7LDG7 609 aa20.86■□□□□ 0.93
COL13A1-206ENST00000456019 PRR12Q9ULL5 1215 aa20.86■□□□□ 0.93
COL13A1-206ENST00000456019 PLXNA1Q9UIW2 1896 aa20.86■□□□□ 0.93
COL13A1-206ENST00000456019 ZNF536O15090 1300 aa20.85■□□□□ 0.93
COL13A1-206ENST00000456019 NEDD4P46934 1319 aa20.85■□□□□ 0.93
COL13A1-206ENST00000456019 SYNGAP1Q96PV0 1343 aa20.85■□□□□ 0.93
COL13A1-206ENST00000456019 IMMTQ16891 758 aaKnown RBP20.85■□□□□ 0.93
COL13A1-206ENST00000456019 ANO1Q5XXA6 986 aa20.85■□□□□ 0.93
COL13A1-206ENST00000456019 ZNF467Q7Z7K2 595 aaPredicted RBP20.85■□□□□ 0.93
COL13A1-206ENST00000456019 AGBL1Q96MI9 1066 aa20.85■□□□□ 0.93
COL13A1-206ENST00000456019 SENP6Q9GZR1 1112 aaPredicted RBP20.85■□□□□ 0.93
COL13A1-206ENST00000456019 ACAD9Q9H845 621 aa20.85■□□□□ 0.93
COL13A1-206ENST00000456019 HOMER2Q9NSB8 354 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms