RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 MAD2L2Q9UI95 211 aa16.67■□□□□ 0.26
HMGXB4-204ENST00000455359 MTMR7Q9Y216 660 aa16.67■□□□□ 0.26
HMGXB4-204ENST00000455359 FRMPD2Q68DX3 1309 aaPredicted RBP16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 VWA5AO00534 786 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 ATP2A1O14983 1001 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 ST18O60284 1047 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 BCRP11274 1271 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 APOBRQ0VD83 1088 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 SYDE2Q5VT97 1194 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 GPRC5AQ8NFJ5 357 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 KIFC2Q96AC6 838 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 CHMP4CQ96CF2 233 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 FBXO28Q9NVF7 368 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 RBPJLQ9UBG7 517 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 PRR12Q9ULL5 1215 aa16.66■□□□□ 0.26
HMGXB4-204ENST00000455359 NID2Q14112 1375 aa16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 TBC1D8O95759 1140 aa16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 COPB2P35606 906 aa16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 METAP2P50579 478 aaKnown RBP eCLIP16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 CCNA1P78396 465 aa16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 RTN1Q16799 776 aa16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 MICU3Q86XE3 530 aa16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 ATG4CQ96DT6 458 aa16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 CTDP1Q9Y5B0 961 aaPredicted RBP16.65■□□□□ 0.26
HMGXB4-204ENST00000455359 PTPRFP10586 1907 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 GOLGA8AA7E2F4 631 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 GOLGA8HP0CJ92 632 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 PDIA3P30101 505 aaKnown RBP16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 MCM2P49736 904 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 AK2P54819 239 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 TRAF1Q13077 416 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 MYL10Q9BUA6 226 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 SPZ1Q9BXG8 430 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 HPS5Q9UPZ3 1129 aa16.64■□□□□ 0.25
HMGXB4-204ENST00000455359 GPR25O00155 361 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 DHX16O60231 1041 aaKnown RBP16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 CTCFP49711 727 aaPredicted RBP16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 ERVK-9P63128 1117 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 ERVK-24P63145 666 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 ARHGEF6Q15052 776 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 TMTC3Q6ZXV5 915 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 ANKRD13CQ8N6S4 541 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 REPS2Q8NFH8 660 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 ZSCAN31Q96LW9 406 aaPredicted RBP16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 TEX13BQ9BXU2 312 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 RANBP17Q9H2T7 1088 aaKnown RBP16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 RIOX1Q9H6W3 641 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 CPA4Q9UI42 421 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 LIMCH1Q9UPQ0 1083 aa16.63■□□□□ 0.25
HMGXB4-204ENST00000455359 CNMDO75829 334 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 SLC25A27O95847 323 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 HSPA1AP0DMV8 641 aaKnown RBP16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 HSPA1BP0DMV9 641 aaKnown RBP16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 SLC16A2P36021 539 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 SP3Q02447 781 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 POTEEQ6S8J3 1075 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 ADGRF4Q8IZF3 695 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 SHCBP1Q8NEM2 672 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 MTMR8Q96EF0 704 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 UBA5Q9GZZ9 404 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 SPATC1LQ9H0A9 340 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 R3HDMLQ9H3Y0 253 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 TXNRD2Q9NNW7 524 aa16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 ZNF214Q9UL59 606 aaPredicted RBP16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 NAP1L2Q9ULW6 460 aaPredicted RBP16.62■□□□□ 0.25
HMGXB4-204ENST00000455359 PFKFB2O60825 505 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 FKTNO75072 461 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 ICAM1P05362 532 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 MAPK4P31152 587 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 STAT3P40763 770 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 TMEM132BQ14DG7 1078 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 TKFCQ3LXA3 575 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 CPLX2Q6PUV4 134 aaKnown RBP16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 ERO1AQ96HE7 468 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 PAGR1Q9BTK6 254 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 MAF1Q9H063 256 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 MROH8Q9H579 483 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 SH2B1Q9NRF2 756 aaPredicted RBP16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 FAM217BQ9NTX9 383 aaPredicted RBP16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 BTBD7Q9P203 1132 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 TPCN1Q9ULQ1 816 aa16.61■□□□□ 0.25
HMGXB4-204ENST00000455359 GNRH1P01148 92 aa16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 RXRAP19793 462 aa16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 KIF22Q14807 665 aa16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 RIOX2Q8IUF8 465 aa16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 CCDC144CPQ8IYA2 1237 aa16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 SRBD1Q8N5C6 995 aaKnown RBP16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 JMJD4Q9H9V9 463 aa16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
HMGXB4-204ENST00000455359 PNMA6FA0A0J9YX94 578 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms