RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 GRB14Q14449 540 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 PLS1Q14651 629 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 CCL14Q16627 93 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 WDR78Q5VTH9 848 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 KCTD1Q719H9 257 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 PRPF38AQ8NAV1 312 aaKnown RBP13.32□□□□□ -0.28
HDAC9-217ENST00000455069 SHCBP1Q8NEM2 672 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 KIFC2Q96AC6 838 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 NUDT12Q9BQG2 462 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 FEM1BQ9UK73 627 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 TNKSO95271 1327 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 MCM3APO60318 1980 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 TMEM232C9JQI7 657 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 E7EWF7 191 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 CDC45O75419 566 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 SNHG28P0DPA3 235 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 PDHBP11177 359 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 NT5C2P49902 561 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 STAT2P52630 851 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 MAP2K5Q13163 448 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 TTBK2Q6IQ55 1244 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 RIOX2Q8IUF8 465 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 CCAR1Q8IX12 1150 aaKnown RBP13.31□□□□□ -0.28
HDAC9-217ENST00000455069 ENAHQ8N8S7 591 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-217ENST00000455069 NPLOC4Q8TAT6 608 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 TTC14Q96N46 770 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 ZSCAN10Q96SZ4 725 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-217ENST00000455069 APBA2Q99767 749 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 KRT23Q9C075 422 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 CNNM2Q9H8M5 875 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 SLC38A10Q9HBR0 1119 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 RIPK3Q9Y572 518 aa13.31□□□□□ -0.28
HDAC9-217ENST00000455069 SLC15A5A6NIM6 579 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 ATP2A1O14983 1001 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 PLA2G6O60733 806 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 XRCC5P13010 732 aaKnown RBP13.3□□□□□ -0.28
HDAC9-217ENST00000455069 CCL5P13501 91 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 STAT3P40763 770 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 NECTIN1Q15223 517 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 SEC23AQ15436 765 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 IQCA1Q86XH1 822 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 NCAPG2Q86XI2 1143 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 DGKHQ86XP1 1220 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 DCAF4Q8WV16 495 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 ANKS1AQ92625 1134 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 UNC93B1Q9H1C4 597 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 FLRT1Q9NZU1 646 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 ZNF536O15090 1300 aa13.3□□□□□ -0.28
HDAC9-217ENST00000455069 FRMPD2Q68DX3 1309 aaPredicted RBP13.3□□□□□ -0.28
HDAC9-217ENST00000455069 TRIOBPQ9H2D6 2365 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 SLC27A2O14975 620 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 COBLO75128 1261 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 SLC25A27O95847 323 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 IGHA2P01877 340 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 HMGCRP04035 888 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 HOXC6P09630 235 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 ADORA2AP29274 412 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 SLC16A2P36021 539 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 RGS2P41220 211 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 ANTXR2P58335 489 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 SNAP25P60880 206 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 ZNF543Q08ER8 600 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 CCDC96Q2M329 555 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 SNRNP48Q6IEG0 339 aaKnown RBP13.29□□□□□ -0.28
HDAC9-217ENST00000455069 KIAA1211Q6ZU35 1233 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 MB21D2Q8IYB1 491 aaPredicted RBP13.29□□□□□ -0.28
HDAC9-217ENST00000455069 CPXCR1Q8N123 301 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 PNMA1Q8ND90 353 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 SHISA4Q96DD7 197 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 TEX13BQ9BXU2 312 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 MROH8Q9H579 483 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 CWC22Q9HCG8 908 aaKnown RBP13.29□□□□□ -0.28
HDAC9-217ENST00000455069 RAVER2Q9HCJ3 691 aaKnown RBP13.29□□□□□ -0.28
HDAC9-217ENST00000455069 BIN2Q9UBW5 565 aaPredicted RBP13.29□□□□□ -0.28
HDAC9-217ENST00000455069 PRR12Q9ULL5 1215 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 ISY1Q9ULR0 285 aaKnown RBP13.29□□□□□ -0.28
HDAC9-217ENST00000455069 IVNS1ABPQ9Y6Y0 642 aa13.29□□□□□ -0.28
HDAC9-217ENST00000455069 TAL1P17542 331 aaPredicted RBP13.28□□□□□ -0.28
HDAC9-217ENST00000455069 UBXN2AP68543 259 aa13.28□□□□□ -0.28
HDAC9-217ENST00000455069 MAP3K21Q5TCX8 1036 aa13.28□□□□□ -0.28
HDAC9-217ENST00000455069 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
HDAC9-217ENST00000455069 BTNL9Q6UXG8 535 aa13.28□□□□□ -0.28
HDAC9-217ENST00000455069 CHURC1Q8WUH1 139 aa13.28□□□□□ -0.28
HDAC9-217ENST00000455069 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
HDAC9-217ENST00000455069 BAZ2BQ9UIF8 2168 aaKnown RBP13.28□□□□□ -0.28
HDAC9-217ENST00000455069 LRRC37A2A6NM11 1700 aa13.27□□□□□ -0.28
HDAC9-217ENST00000455069 STRNO43815 780 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 ZBED4O75132 1171 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 GOLGA8HP0CJ92 632 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 ZKSCAN1P17029 563 aaPredicted RBP13.27□□□□□ -0.29
HDAC9-217ENST00000455069 OAZ1P54368 228 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.29
HDAC9-217ENST00000455069 CCDC178Q5BJE1 867 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 CHST3Q7LGC8 479 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 ABRAQ8N0Z2 381 aa13.27□□□□□ -0.29
HDAC9-217ENST00000455069 NCOA7Q8NI08 942 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms