RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 GUCD1Q96NT3 240 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 TINF2Q9BSI4 451 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 TSEN34Q9BSV6 310 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 TEX13BQ9BXU2 312 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 BOLA2Q9H3K6 86 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 PDLIM7Q9NR12 457 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 ZBTB40Q9NUA8 1239 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 PPP1R9AQ9ULJ8 1098 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 SLC4A4Q9Y6R1 1079 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 COL6A3P12111 3177 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 SYNGAP1Q96PV0 1343 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 POTEMA6NI47 508 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 PRKAB2O43741 272 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 RAD21O60216 631 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 CLTBP09497 229 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 SHHQ15465 462 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 LRRFIP1Q32MZ4 808 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 ZNF792Q3KQV3 632 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 FAM47AQ5JRC9 791 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 KIAA1755Q5JYT7 1200 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 PRAMEF19Q5SWL8 479 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 ANO1Q5XXA6 986 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 CCDC174Q6PII3 467 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 BADQ92934 168 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 GPATCH3Q96I76 525 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 SLF1Q9BQI6 1058 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 LRRCC1Q9C099 1032 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 MKNK2Q9HBH9 465 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 SYNPO2Q9UMS6 1093 aa9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 CTDP1Q9Y5B0 961 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-209ENST00000454952 MROH7Q68CQ1 1323 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 MOXD2PA6NHM9 499 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 DCDC2CA8MYV0 355 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 KIAA0355O15063 1070 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 RAG1P15918 1043 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 TLE2Q04725 743 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 SBK1Q52WX2 424 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 FAM83BQ5T0W9 1011 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 CTR9Q6PD62 1173 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 CLEC10AQ8IUN9 316 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 FERMT2Q96AC1 680 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 DDX11Q96FC9 970 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 TOX2Q96NM4 488 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 BCL11AQ9H165 835 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 SPC25Q9HBM1 224 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 ZNF214Q9UL59 606 aaPredicted RBP9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 FAM184BQ9ULE4 1060 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 GREB1LQ9C091 1923 aaPredicted RBP9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 MYH4Q9Y623 1939 aa9.6□□□□□ -0.87
NIF3L1-209ENST00000454952 A0A1W2PQ45 241 aaPredicted RBP9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 A0A1W2PQY0 241 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 ATP2A1O14983 1001 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 ZBED4O75132 1171 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 PGK2P07205 417 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 ZFYP08048 801 aaPredicted RBP9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 FDX1P10109 184 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 GNAT2P19087 354 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 FPGSQ05932 587 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 MAMDC4Q6UXC1 1216 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 ANKRD33Q7Z3H0 272 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 SIRT2Q8IXJ6 389 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 PRPF38AQ8NAV1 312 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 PCSK9Q8NBP7 692 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 MAFAQ8NHW3 353 aaPredicted RBP9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 RNPC3Q96LT9 517 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 FAM161BQ96MY7 647 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 PHF12Q96QT6 1004 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 CDX2Q99626 313 aaPredicted RBP9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 SEMA6BQ9H3T3 888 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 STARD7Q9NQZ5 370 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 TMEM39AQ9NV64 488 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 FBXO28Q9NVF7 368 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 NYAP2Q9P242 653 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 FBXO40Q9UH90 709 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
NIF3L1-209ENST00000454952 CYP2D7A0A087X1C5 515 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 TRIM43BA6NCK2 446 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 PQBP1O60828 265 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 DUSP11O75319 330 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 PGK1P00558 417 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 SLC3A2P08195 630 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 ZNF865P0CJ78 1059 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 ACLYP53396 1101 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 OAZ1P54368 228 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 C9orf50Q5SZB4 431 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 SNRNP48Q6IEG0 339 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 REPS2Q8NFH8 660 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 TRIM43Q96BQ3 446 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 GLT1D1Q96MS3 346 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 STRBPQ96SI9 672 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 COL25A1Q9BXS0 654 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 ECHDC1Q9NTX5 307 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 FEM1BQ9UK73 627 aa9.58□□□□□ -0.88
NIF3L1-209ENST00000454952 ELP1O95163 1332 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 DNAJC25-GNG10A0A024R161 153 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms