RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 TCP11L1Q9NUJ3 509 aa29.32■■■□□ 2.28
MSH2-203ENST00000454849 TNRC18O15417 2968 aaPredicted RBP29.32■■■□□ 2.28
MSH2-203ENST00000454849 COBLO75128 1261 aa29.31■■■□□ 2.28
MSH2-203ENST00000454849 TOP1P11387 765 aaKnown RBP29.31■■■□□ 2.28
MSH2-203ENST00000454849 PCP11498 1178 aaKnown RBP29.31■■■□□ 2.28
MSH2-203ENST00000454849 NOVP48745 357 aa29.31■■■□□ 2.28
MSH2-203ENST00000454849 SNRNP48Q6IEG0 339 aaKnown RBP29.31■■■□□ 2.28
MSH2-203ENST00000454849 RCSD1Q6JBY9 416 aa29.31■■■□□ 2.28
MSH2-203ENST00000454849 RIOX2Q8IUF8 465 aa29.31■■■□□ 2.28
MSH2-203ENST00000454849 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.31■■■□□ 2.28
MSH2-203ENST00000454849 RIPK3Q9Y572 518 aa29.31■■■□□ 2.28
MSH2-203ENST00000454849 FRMPD2Q68DX3 1309 aaPredicted RBP29.3■■■□□ 2.28
MSH2-203ENST00000454849 GJA8P48165 433 aa29.3■■■□□ 2.28
MSH2-203ENST00000454849 CACNB2Q08289 660 aaPredicted RBP29.3■■■□□ 2.28
MSH2-203ENST00000454849 TTBK2Q6IQ55 1244 aa29.3■■■□□ 2.28
MSH2-203ENST00000454849 GPCPD1Q9NPB8 672 aa29.3■■■□□ 2.28
MSH2-203ENST00000454849 TAF6LQ9Y6J9 622 aa29.3■■■□□ 2.28
MSH2-203ENST00000454849 SLC25A27O95847 323 aa29.29■■■□□ 2.28
MSH2-203ENST00000454849 TFRCP02786 760 aaKnown RBP29.29■■■□□ 2.28
MSH2-203ENST00000454849 PGK2P07205 417 aa29.29■■■□□ 2.28
MSH2-203ENST00000454849 MMP19Q99542 508 aa29.29■■■□□ 2.28
MSH2-203ENST00000454849 HMX1Q9NP08 348 aaPredicted RBP29.29■■■□□ 2.28
MSH2-203ENST00000454849 ZSWIM5Q9P217 1185 aa29.29■■■□□ 2.28
MSH2-203ENST00000454849 RBBP6Q7Z6E9 1792 aaKnown RBP29.29■■■□□ 2.28
MSH2-203ENST00000454849 STRNO43815 780 aa29.28■■■□□ 2.28
MSH2-203ENST00000454849 SGPL1O95470 568 aa29.28■■■□□ 2.28
MSH2-203ENST00000454849 FCER1AP12319 257 aa29.28■■■□□ 2.28
MSH2-203ENST00000454849 CYP2C19P33261 490 aa29.28■■■□□ 2.28
MSH2-203ENST00000454849 SLC16A2P36021 539 aa29.28■■■□□ 2.28
MSH2-203ENST00000454849 STAT2P52630 851 aa29.28■■■□□ 2.28
MSH2-203ENST00000454849 TEX13BQ9BXU2 312 aa29.28■■■□□ 2.28
MSH2-203ENST00000454849 SLC38A10Q9HBR0 1119 aa29.28■■■□□ 2.28
MSH2-203ENST00000454849 PAK6Q9NQU5 681 aaPredicted RBP29.28■■■□□ 2.28
MSH2-203ENST00000454849 RPTORQ8N122 1335 aa29.27■■■□□ 2.28
MSH2-203ENST00000454849 CCND3P30281 292 aaPredicted RBP29.27■■■□□ 2.28
MSH2-203ENST00000454849 TRMT44Q8IYL2 757 aaKnown RBP29.27■■■□□ 2.28
MSH2-203ENST00000454849 CHURC1Q8WUH1 139 aa29.27■■■□□ 2.28
MSH2-203ENST00000454849 LAMA4Q16363 1823 aa29.27■■■□□ 2.28
MSH2-203ENST00000454849 CYP21A2P08686 494 aa29.26■■■□□ 2.27
MSH2-203ENST00000454849 MAP3K21Q5TCX8 1036 aa29.26■■■□□ 2.27
MSH2-203ENST00000454849 CCDC174Q6PII3 467 aa29.26■■■□□ 2.27
MSH2-203ENST00000454849 DCAF4Q8WV16 495 aa29.26■■■□□ 2.27
MSH2-203ENST00000454849 HOMER2Q9NSB8 354 aa29.26■■■□□ 2.27
MSH2-203ENST00000454849 U3KPZ7 1027 aaPredicted RBP29.26■■■□□ 2.27
MSH2-203ENST00000454849 MKI67P46013 3256 aaKnown RBP29.25■■■□□ 2.27
MSH2-203ENST00000454849 HOXC6P09630 235 aa29.25■■■□□ 2.27
MSH2-203ENST00000454849 TAL1P17542 331 aaPredicted RBP29.25■■■□□ 2.27
MSH2-203ENST00000454849 BMP2KLQ5H9B9 411 aa29.25■■■□□ 2.27
MSH2-203ENST00000454849 MFSD14CQ5VZR4 134 aa29.25■■■□□ 2.27
MSH2-203ENST00000454849 FAM160B2Q86V87 743 aa29.25■■■□□ 2.27
MSH2-203ENST00000454849 AGBL1Q96MI9 1066 aa29.25■■■□□ 2.27
MSH2-203ENST00000454849 ZSCAN10Q96SZ4 725 aaPredicted RBP29.25■■■□□ 2.27
MSH2-203ENST00000454849 ESYT1Q9BSJ8 1104 aa29.25■■■□□ 2.27
MSH2-203ENST00000454849 KRT23Q9C075 422 aa29.25■■■□□ 2.27
MSH2-203ENST00000454849 PRR12Q9ULL5 1215 aa29.25■■■□□ 2.27
MSH2-203ENST00000454849 KCTD2Q14681 263 aa29.24■■■□□ 2.27
MSH2-203ENST00000454849 CYB5R4Q7L1T6 521 aa29.24■■■□□ 2.27
MSH2-203ENST00000454849 IQCA1Q86XH1 822 aa29.24■■■□□ 2.27
MSH2-203ENST00000454849 TTC14Q96N46 770 aa29.24■■■□□ 2.27
MSH2-203ENST00000454849 KIAA1211Q6ZU35 1233 aa29.23■■■□□ 2.27
MSH2-203ENST00000454849 ABRAQ8N0Z2 381 aa29.23■■■□□ 2.27
MSH2-203ENST00000454849 RBM8AQ9Y5S9 174 aaKnown RBP29.23■■■□□ 2.27
MSH2-203ENST00000454849 PDE4DIPQ5VU43 2346 aa29.23■■■□□ 2.27
MSH2-203ENST00000454849 GOLGA8HP0CJ92 632 aa29.22■■■□□ 2.27
MSH2-203ENST00000454849 PDHBP11177 359 aa29.22■■■□□ 2.27
MSH2-203ENST00000454849 PRAMEF19Q5SWL8 479 aa29.22■■■□□ 2.27
MSH2-203ENST00000454849 ENAHQ8N8S7 591 aaPredicted RBP29.22■■■□□ 2.27
MSH2-203ENST00000454849 TRPV1Q8NER1 839 aa29.22■■■□□ 2.27
MSH2-203ENST00000454849 MAP4K1Q92918 833 aa29.22■■■□□ 2.27
MSH2-203ENST00000454849 CNNM2Q9H8M5 875 aa29.22■■■□□ 2.27
MSH2-203ENST00000454849 TNKSO95271 1327 aa29.21■■■□□ 2.27
MSH2-203ENST00000454849 ATP2A1O14983 1001 aa29.21■■■□□ 2.27
MSH2-203ENST00000454849 CNGA1P29973 690 aa29.21■■■□□ 2.27
MSH2-203ENST00000454849 STOX1Q6ZVD7 989 aa29.21■■■□□ 2.27
MSH2-203ENST00000454849 DGKHQ86XP1 1220 aa29.21■■■□□ 2.27
MSH2-203ENST00000454849 LSG1Q9H089 658 aaKnown RBP29.21■■■□□ 2.27
MSH2-203ENST00000454849 CPVLQ9H3G5 476 aa29.21■■■□□ 2.27
MSH2-203ENST00000454849 ZNF536O15090 1300 aa29.2■■■□□ 2.27
MSH2-203ENST00000454849 FARP2O94887 1054 aaPredicted RBP29.2■■■□□ 2.26
MSH2-203ENST00000454849 CENPBP07199 599 aaPredicted RBP29.2■■■□□ 2.26
MSH2-203ENST00000454849 COPB2P35606 906 aa29.2■■■□□ 2.26
MSH2-203ENST00000454849 CHST3Q7LGC8 479 aa29.2■■■□□ 2.26
MSH2-203ENST00000454849 MAML3Q96JK9 1138 aa29.2■■■□□ 2.26
MSH2-203ENST00000454849 UBAC1Q9BSL1 405 aa29.2■■■□□ 2.26
MSH2-203ENST00000454849 KAT14Q9H8E8 782 aa29.2■■■□□ 2.26
MSH2-203ENST00000454849 SLC5A4Q9NY91 659 aa29.2■■■□□ 2.26
MSH2-203ENST00000454849 E7EWF7 191 aa29.19■■■□□ 2.26
MSH2-203ENST00000454849 PLA2G6O60733 806 aa29.19■■■□□ 2.26
MSH2-203ENST00000454849 SYDE2Q5VT97 1194 aa29.19■■■□□ 2.26
MSH2-203ENST00000454849 PNMA1Q8ND90 353 aa29.19■■■□□ 2.26
MSH2-203ENST00000454849 DIS3LQ8TF46 1054 aaKnown RBP29.19■■■□□ 2.26
MSH2-203ENST00000454849 DDX11Q96FC9 970 aa29.19■■■□□ 2.26
MSH2-203ENST00000454849 CRISPLD2Q9H0B8 497 aa29.19■■■□□ 2.26
MSH2-203ENST00000454849 ANO2Q9NQ90 1003 aa29.19■■■□□ 2.26
MSH2-203ENST00000454849 ZNFX1Q9P2E3 1918 aaKnown RBP29.19■■■□□ 2.26
MSH2-203ENST00000454849 ALAS1P13196 640 aa29.18■■■□□ 2.26
MSH2-203ENST00000454849 ZNF543Q08ER8 600 aa29.18■■■□□ 2.26
MSH2-203ENST00000454849 TRDNQ13061 729 aa29.18■■■□□ 2.26
MSH2-203ENST00000454849 OLFML2BQ68BL8 750 aa29.18■■■□□ 2.26
MSH2-203ENST00000454849 UBA5Q9GZZ9 404 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms