RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SMCO2A6NFE2 343 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 SLFN14P0C7P3 912 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 CALM1P0DP23 149 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 CALM2P0DP24 149 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 CALM3P0DP25 149 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 NBPF3Q9H094 633 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
DDR1-240ENST00000454612 NOP2P46087 812 aaKnown RBP12.54□□□□□ -0.4
DDR1-240ENST00000454612 RESP18Q5W5W9 173 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 BLIDQ8IZY5 108 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 PAGE5Q96GU1 130 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 CCDC43Q96MW1 224 aaKnown RBP12.54□□□□□ -0.4
DDR1-240ENST00000454612 IMPACTQ9P2X3 320 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 ZNF804BA4D1E1 1349 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 CLGNO14967 610 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 SLC35F6Q8N357 371 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
DDR1-240ENST00000454612 TCEAL9Q9UHQ7 104 aa12.54□□□□□ -0.4
DDR1-240ENST00000454612 A0A0U1RQJ8 604 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 CTAGE15A4D2H0 777 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 FOXP2O15409 715 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
DDR1-240ENST00000454612 CTAGE8P0CG41 777 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 TOB1P50616 345 aaPredicted RBP12.53□□□□□ -0.4
DDR1-240ENST00000454612 CLCN6P51797 869 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 CTAGE6Q86UF2 777 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 CTAGE4Q8IX94 777 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
DDR1-240ENST00000454612 ATRIPQ8WXE1 791 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 EYA3Q99504 573 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
DDR1-240ENST00000454612 ZC3H12CQ9C0D7 883 aaKnown RBP12.53□□□□□ -0.4
DDR1-240ENST00000454612 CHMP2AO43633 222 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 SRGAP2O75044 1071 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 PPP6R2O75170 966 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 PTPREP23469 700 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 LIFRP42702 1097 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 CHMP4BP1P59074 171 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 TXLNBQ8N3L3 684 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 NWD2Q9ULI1 1742 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 B4DLN1 442 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 CXCR5P32302 372 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 USP8P40818 1118 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 MORC3Q14149 939 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 CTR9Q6PD62 1173 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 NBPF11Q86T75 865 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 KIAA0825Q8IV33 1275 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 VSTM4Q8IW00 320 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 CCDC148Q8NFR7 591 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 CCDC42Q96M95 316 aa12.53□□□□□ -0.4
DDR1-240ENST00000454612 BCL9O00512 1426 aa12.52□□□□□ -0.4
DDR1-240ENST00000454612 KCNJ18B7U540 433 aa12.52□□□□□ -0.4
DDR1-240ENST00000454612 LDHCP07864 332 aa12.52□□□□□ -0.4
DDR1-240ENST00000454612 PRPF4BQ13523 1007 aaKnown RBP12.52□□□□□ -0.4
DDR1-240ENST00000454612 KCNJ12Q14500 433 aa12.52□□□□□ -0.4
DDR1-240ENST00000454612 TTC31Q49AM3 519 aaPredicted RBP12.52□□□□□ -0.4
DDR1-240ENST00000454612 TYW1BQ6NUM6 668 aa12.52□□□□□ -0.4
DDR1-240ENST00000454612 ZBTB21Q9ULJ3 1066 aa12.52□□□□□ -0.4
DDR1-240ENST00000454612 TRAF5O00463 557 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 ERLIN1O75477 346 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 NFIXQ14938 502 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 ZFYVE27Q5T4F4 411 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 NCAPH2Q6IBW4 605 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 RGS22Q8NE09 1264 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 GOLGA1Q92805 767 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 MXD3Q9BW11 206 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 BTDP43251 543 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 RBM43Q6ZSC3 357 aaKnown RBP12.52□□□□□ -0.41
DDR1-240ENST00000454612 RRP36Q96EU6 259 aaKnown RBP12.52□□□□□ -0.41
DDR1-240ENST00000454612 DCP1AQ9NPI6 582 aaPredicted RBP12.52□□□□□ -0.41
DDR1-240ENST00000454612 TRIM10Q9UDY6 481 aa12.52□□□□□ -0.41
DDR1-240ENST00000454612 DDX41Q9UJV9 622 aaKnown RBP12.52□□□□□ -0.41
DDR1-240ENST00000454612 LLGL1Q15334 1064 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 CT47A1Q5JQC4 288 aaPredicted RBP12.51□□□□□ -0.41
DDR1-240ENST00000454612 KCTD1Q719H9 257 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 CABP7Q86V35 215 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 SPICE1Q8N0Z3 855 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 PIGSQ96S52 555 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 SCAF8Q9UPN6 1271 aaKnown RBP12.51□□□□□ -0.41
DDR1-240ENST00000454612 AFDNP55196 1824 aaKnown RBP12.51□□□□□ -0.41
DDR1-240ENST00000454612 TMCO5BA8MYB1 307 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 CALML3P27482 149 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 UBE2SQ16763 222 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 FOXP1Q9H334 677 aaPredicted RBP12.51□□□□□ -0.41
DDR1-240ENST00000454612 FAM217BQ9NTX9 383 aaPredicted RBP12.51□□□□□ -0.41
DDR1-240ENST00000454612 BCCIPQ9P287 314 aaKnown RBP eCLIP12.51□□□□□ -0.41
DDR1-240ENST00000454612 RFX7Q2KHR2 1363 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 WNT7AO00755 349 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
DDR1-240ENST00000454612 PLCD1P51178 756 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 UBXN2AP68543 259 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 TRIM28Q13263 835 aaKnown RBP12.51□□□□□ -0.41
DDR1-240ENST00000454612 TMEM266Q2M3C6 531 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 RBM26Q5T8P6 1007 aaKnown RBP12.51□□□□□ -0.41
DDR1-240ENST00000454612 SARM1Q6SZW1 724 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 ZNF804AQ7Z570 1209 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 C6orf50Q9HD87 102 aa12.51□□□□□ -0.41
DDR1-240ENST00000454612 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms