RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ZRANB2O95218 330 aaKnown RBP eCLIP14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 IL1R1P14778 569 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 VEGFAP15692 232 aaPredicted RBP14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 PLCG2P16885 1265 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 RASA1P20936 1047 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 PPP1R2P41236 205 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 USP5P45974 858 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 RBL2Q08999 1139 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 KRT31Q15323 416 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 SLC35G1Q2M3R5 365 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 C16orf86Q6ZW13 317 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 RSRC2Q7L4I2 434 aaKnown RBP14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 TMTC1Q8IUR5 882 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 UBXN4Q92575 508 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 RTFDC1Q9BY42 306 aaPredicted RBP14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 ZMYND12Q9H0C1 365 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 KBTBD4Q9NVX7 518 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 ARGLU1Q9NWB6 273 aaPredicted RBP14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 ZNF446Q9NWS9 450 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 PCDHA6Q9UN73 950 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 PCDHA8Q9Y5H6 950 aa14.15□□□□□ -0.14
ECHDC1-209ENST00000454591 QSER1Q2KHR3 1735 aa14.15□□□□□ -0.15
ECHDC1-209ENST00000454591 GPR75-ASB3A0A0A6YYF3 556 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 A0A1W2PQC6 194 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 ESYT2A0FGR8 921 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 NUTM2BA6NNL0 878 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 NUTM2EB1AL46 878 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 hCG_1984214I3L0E3 225 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 URI1O94763 535 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 RHOBTB3O94955 611 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 GYPCP04921 128 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 MCM7P33993 719 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 COPB1P53618 953 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 CRY2Q49AN0 593 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 NAALADL2Q58DX5 795 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 TCP11X2Q5H9J9 407 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 RRAGBQ5VZM2 374 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 WWC2Q6AWC2 1192 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 ADSSL1Q8N142 457 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 GPR161Q8N6U8 529 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 ZNF713Q8N859 430 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 LRRN4CLQ8ND94 238 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 MNS1Q8NEH6 495 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 ANKRD20A12PQ8NF67 263 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 NEDD1Q8NHV4 660 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 SH3RF3Q8TEJ3 882 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 NOC3LQ8WTT2 800 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 CCDC12Q8WUD4 166 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 WDR24Q96S15 920 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 MYO1AQ9UBC5 1043 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 CCNL1Q9UK58 526 aaPredicted RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 TTF2Q9UNY4 1162 aaKnown RBP14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 CTNND2Q9UQB3 1225 aa14.14□□□□□ -0.15
ECHDC1-209ENST00000454591 CCDC194A0A1B0GVG4 234 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 ADAMTS3O15072 1205 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 KLRC4O43908 158 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 KIF20AO95235 890 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 ATP2B4P23634 1241 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 CASP1P29466 404 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 CLCN6P51797 869 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 GNG11P61952 73 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 ARHGAP29Q52LW3 1261 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 TYW1BQ6NUM6 668 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 RAD9BQ6WBX8 426 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 DTHD1Q6ZMT9 781 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 KRT25Q7Z3Z0 450 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 ZNF444Q8N0Y2 327 aaPredicted RBP14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 STAG2Q8N3U4 1231 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 TMEM47Q9BQJ4 181 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 THAP9Q9H5L6 903 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 V9GYY5 206 aaPredicted RBP14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 GAKO14976 1311 aa14.13□□□□□ -0.15
ECHDC1-209ENST00000454591 BAZ2BQ9UIF8 2168 aaKnown RBP14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 CYTH3O43739 400 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 EEF1GP26641 437 aaKnown RBP14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 STAT6P42226 847 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 STX17P56962 302 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 HSP90AA4PQ58FG1 418 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 JAKMIP3Q5VZ66 844 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 KLHL10Q6JEL2 608 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 ZNF662Q6ZS27 426 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 NELFBQ8WX92 580 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 RABGGTAQ92696 567 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 ARID3AQ99856 593 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 CARD6Q9BX69 1037 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 MRPL44Q9H9J2 332 aaKnown RBP14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 MKNK2Q9HBH9 465 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 PODXL2Q9NZ53 605 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 MYH8P13535 1937 aa14.12□□□□□ -0.15
ECHDC1-209ENST00000454591 KCNJ18B7U540 433 aa14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 TOM1O60784 492 aa14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 TSPY3P0CV98 308 aa14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 TSPY8P0CW00 308 aa14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 KCNJ12Q14500 433 aa14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 SLF2Q8IX21 1173 aa14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 SMYD4Q8IYR2 804 aaPredicted RBP14.11□□□□□ -0.15
ECHDC1-209ENST00000454591 GIMAP8Q8ND71 665 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms