RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 FGRP09769 529 aa12.75□□□□□ -0.37
LMCD1-205ENST00000454244 BMP3P12645 472 aa12.75□□□□□ -0.37
LMCD1-205ENST00000454244 CYBAP13498 195 aa12.75□□□□□ -0.37
LMCD1-205ENST00000454244 HAND2P61296 217 aa12.75□□□□□ -0.37
LMCD1-205ENST00000454244 KCTD2Q14681 263 aa12.75□□□□□ -0.37
LMCD1-205ENST00000454244 HABP4Q5JVS0 413 aaKnown RBP12.75□□□□□ -0.37
LMCD1-205ENST00000454244 SNRNP48Q6IEG0 339 aaKnown RBP12.75□□□□□ -0.37
LMCD1-205ENST00000454244 MAML3Q96JK9 1138 aa12.75□□□□□ -0.37
LMCD1-205ENST00000454244 DIAPH3Q9NSV4 1193 aa12.75□□□□□ -0.37
LMCD1-205ENST00000454244 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
LMCD1-205ENST00000454244 RIPK3Q9Y572 518 aa12.75□□□□□ -0.37
LMCD1-205ENST00000454244 CENPFP49454 3210 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 ZMYM6O95789 1325 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 TMEM232C9JQI7 657 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 MSCO60682 206 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 MCCP23508 829 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 PDE4AP27815 886 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 SLC1A4P43007 532 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 MFAP1P55081 439 aaKnown RBP12.74□□□□□ -0.37
LMCD1-205ENST00000454244 PRAMEF19Q5SWL8 479 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 CWC27Q6UX04 472 aaKnown RBP12.74□□□□□ -0.37
LMCD1-205ENST00000454244 GMCL1Q96IK5 515 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 SLC38A10Q9HBR0 1119 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
LMCD1-205ENST00000454244 MTMR7Q9Y216 660 aa12.74□□□□□ -0.37
LMCD1-205ENST00000454244 PFASO15067 1338 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 HIP1O00291 1037 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 ATP2A1O14983 1001 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 IKQ13123 557 aaPredicted RBP12.73□□□□□ -0.37
LMCD1-205ENST00000454244 ZNF792Q3KQV3 632 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 ANO1Q5XXA6 986 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 FAM160B2Q86V87 743 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 C7orf61Q8IZ16 206 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 STAG1Q8WVM7 1258 aa12.73□□□□□ -0.37
LMCD1-205ENST00000454244 ZNF236Q9UL36 1845 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 SEPT4O43236 478 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 COL6A1P12109 1028 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 NOVP48745 357 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 STAT2P52630 851 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 OAZ1P54368 228 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 AKNAD1Q5T1N1 836 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 RCSD1Q6JBY9 416 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 MFSD6Q6ZSS7 791 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 KCTD1Q719H9 257 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 RASGRP2Q7LDG7 609 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 CHURC1Q8WUH1 139 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 DDX11Q96FC9 970 aa12.72□□□□□ -0.37
LMCD1-205ENST00000454244 DIS3Q9Y2L1 958 aaKnown RBP12.72□□□□□ -0.37
LMCD1-205ENST00000454244 ZNF213O14771 459 aa12.71□□□□□ -0.37
LMCD1-205ENST00000454244 FDX1P10109 184 aa12.71□□□□□ -0.37
LMCD1-205ENST00000454244 PCP11498 1178 aaKnown RBP12.71□□□□□ -0.37
LMCD1-205ENST00000454244 GSPT1P15170 499 aaKnown RBP12.71□□□□□ -0.37
LMCD1-205ENST00000454244 CCDC96Q2M329 555 aa12.71□□□□□ -0.37
LMCD1-205ENST00000454244 TTC22Q5TAA0 569 aa12.71□□□□□ -0.37
LMCD1-205ENST00000454244 TMEM47Q9BQJ4 181 aa12.71□□□□□ -0.37
LMCD1-205ENST00000454244 TINF2Q9BSI4 451 aa12.71□□□□□ -0.37
LMCD1-205ENST00000454244 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
LMCD1-205ENST00000454244 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.37
LMCD1-205ENST00000454244 ZMYND8Q9ULU4 1186 aaPredicted RBP12.71□□□□□ -0.37
LMCD1-205ENST00000454244 PARP14Q460N5 1801 aa12.71□□□□□ -0.38
LMCD1-205ENST00000454244 DNAJC25-GNG10A0A024R161 153 aa12.7□□□□□ -0.38
LMCD1-205ENST00000454244 PLA2G6O60733 806 aa12.7□□□□□ -0.38
LMCD1-205ENST00000454244 TOP1P11387 765 aaKnown RBP12.7□□□□□ -0.38
LMCD1-205ENST00000454244 TAL1P17542 331 aaPredicted RBP12.7□□□□□ -0.38
LMCD1-205ENST00000454244 SNAP25P60880 206 aa12.7□□□□□ -0.38
LMCD1-205ENST00000454244 GJC2Q5T442 439 aaPredicted RBP12.7□□□□□ -0.38
LMCD1-205ENST00000454244 CHST13Q8NET6 341 aa12.7□□□□□ -0.38
LMCD1-205ENST00000454244 DCAF4Q8WV16 495 aa12.7□□□□□ -0.38
LMCD1-205ENST00000454244 SENP6Q9GZR1 1112 aaPredicted RBP12.7□□□□□ -0.38
LMCD1-205ENST00000454244 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
LMCD1-205ENST00000454244 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
LMCD1-205ENST00000454244 FBXO40Q9UH90 709 aa12.7□□□□□ -0.38
LMCD1-205ENST00000454244 NRBP1Q9UHY1 535 aa12.7□□□□□ -0.38
LMCD1-205ENST00000454244 PRR12Q9ULL5 1215 aa12.7□□□□□ -0.38
LMCD1-205ENST00000454244 ZNF536O15090 1300 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 NEDD4P46934 1319 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 DNM1LO00429 736 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
LMCD1-205ENST00000454244 LRRC26Q2I0M4 334 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 TTBK2Q6IQ55 1244 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 CCDC174Q6PII3 467 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.69□□□□□ -0.38
LMCD1-205ENST00000454244 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 ARRDC4Q8NCT1 418 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 ESR2Q92731 530 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 AGBL1Q96MI9 1066 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 DSCC1Q9BVC3 393 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 IL25Q9H293 177 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 RNF146Q9NTX7 359 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 CNPY2Q9Y2B0 182 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 MKI67P46013 3256 aaKnown RBP12.69□□□□□ -0.38
LMCD1-205ENST00000454244 BRCA2P51587 3418 aa12.69□□□□□ -0.38
LMCD1-205ENST00000454244 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
LMCD1-205ENST00000454244 FRMPD2Q68DX3 1309 aaPredicted RBP12.68□□□□□ -0.38
LMCD1-205ENST00000454244 COL11A1P12107 1806 aaPredicted RBP12.68□□□□□ -0.38
LMCD1-205ENST00000454244 SNAI1O95863 264 aaPredicted RBP12.68□□□□□ -0.38
LMCD1-205ENST00000454244 ZNF865P0CJ78 1059 aaPredicted RBP12.68□□□□□ -0.38
LMCD1-205ENST00000454244 ALAS1P13196 640 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms