RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 FDX1P10109 184 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 PCP11498 1178 aaKnown RBP12.63□□□□□ -0.39
DDX39A-203ENST00000454233 SLC1A4P43007 532 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 SLC4A3P48751 1232 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 HAND2P61296 217 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 LHX8Q68G74 356 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 CWC27Q6UX04 472 aaKnown RBP12.63□□□□□ -0.39
DDX39A-203ENST00000454233 FAM160B2Q86V87 743 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 CPXCR1Q8N123 301 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 CHURC1Q8WUH1 139 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 GMCL1Q96IK5 515 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 C11orf49Q9H6J7 331 aa12.63□□□□□ -0.39
DDX39A-203ENST00000454233 DDX20Q9UHI6 824 aaKnown RBP12.63□□□□□ -0.39
DDX39A-203ENST00000454233 TMEM232C9JQI7 657 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 ATP2A1O14983 1001 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 NMT2O60551 498 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 FGRP09769 529 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 CYBAP13498 195 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 MCCP23508 829 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 STAT2P52630 851 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 MFSD6Q6ZSS7 791 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 STAG1Q8WVM7 1258 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 MAML3Q96JK9 1138 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 RNF41Q9H4P4 317 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-203ENST00000454233 SLC38A10Q9HBR0 1119 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 RAVER2Q9HCJ3 691 aaKnown RBP12.62□□□□□ -0.39
DDX39A-203ENST00000454233 IL17RBQ9NRM6 502 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 DIS3Q9Y2L1 958 aaKnown RBP12.62□□□□□ -0.39
DDX39A-203ENST00000454233 TACC3Q9Y6A5 838 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 BRCA2P51587 3418 aa12.62□□□□□ -0.39
DDX39A-203ENST00000454233 ZNF213O14771 459 aa12.61□□□□□ -0.39
DDX39A-203ENST00000454233 IGHA2P01877 340 aa12.61□□□□□ -0.39
DDX39A-203ENST00000454233 PGK2P07205 417 aa12.61□□□□□ -0.39
DDX39A-203ENST00000454233 OAZ1P54368 228 aa12.61□□□□□ -0.39
DDX39A-203ENST00000454233 RCSD1Q6JBY9 416 aa12.61□□□□□ -0.39
DDX39A-203ENST00000454233 CHMP4CQ96CF2 233 aa12.61□□□□□ -0.39
DDX39A-203ENST00000454233 FBXO40Q9UH90 709 aa12.61□□□□□ -0.39
DDX39A-203ENST00000454233 MTMR7Q9Y216 660 aa12.61□□□□□ -0.39
DDX39A-203ENST00000454233 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
DDX39A-203ENST00000454233 PLA2G6O60733 806 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 TOP1P11387 765 aaKnown RBP12.6□□□□□ -0.39
DDX39A-203ENST00000454233 PDE4AP27815 886 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-203ENST00000454233 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 ZNF792Q3KQV3 632 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 HABP4Q5JVS0 413 aaKnown RBP12.6□□□□□ -0.39
DDX39A-203ENST00000454233 TTC22Q5TAA0 569 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 TRPV1Q8NER1 839 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 CHST13Q8NET6 341 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 ESR2Q92731 530 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 DSCC1Q9BVC3 393 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 TCP11L1Q9NUJ3 509 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 NRBP1Q9UHY1 535 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 RIPK3Q9Y572 518 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 ZNFX1Q9P2E3 1918 aaKnown RBP12.6□□□□□ -0.39
DDX39A-203ENST00000454233 CEP290O15078 2479 aa12.6□□□□□ -0.39
DDX39A-203ENST00000454233 SEPT4O43236 478 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 NOVP48745 357 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 NT5C2P49902 561 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 KCTD1Q719H9 257 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 TBC1D10CQ8IV04 446 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 C7orf61Q8IZ16 206 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 ANKRD35Q8N283 1001 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 ARRDC4Q8NCT1 418 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 TINF2Q9BSI4 451 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 CTNNA3Q9UI47 895 aa12.59□□□□□ -0.39
DDX39A-203ENST00000454233 COLQQ9Y215 455 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-203ENST00000454233 SLC34A2O95436 690 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 COL6A1P12109 1028 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 IMMTQ16891 758 aaKnown RBP12.58□□□□□ -0.4
DDX39A-203ENST00000454233 TKFCQ3LXA3 575 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 CCDC178Q5BJE1 867 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 PRAMEF19Q5SWL8 479 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDX39A-203ENST00000454233 MSL3Q8N5Y2 521 aaKnown RBP12.58□□□□□ -0.4
DDX39A-203ENST00000454233 RUFY2Q8WXA3 655 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 TTC14Q96N46 770 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 ACAD9Q9H845 621 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 HOMER2Q9NSB8 354 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 CNPY2Q9Y2B0 182 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 PFASO15067 1338 aa12.58□□□□□ -0.4
DDX39A-203ENST00000454233 DNAJC25-GNG10A0A024R161 153 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 KBTBD13C9JR72 458 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 DNM1LO00429 736 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-203ENST00000454233 GSPT1P15170 499 aaKnown RBP12.57□□□□□ -0.4
DDX39A-203ENST00000454233 ANO1Q5XXA6 986 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 CCDC174Q6PII3 467 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 IQCA1Q86XH1 822 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-203ENST00000454233 RNF146Q9NTX7 359 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 FRMPD3Q5JV73 1810 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 NEDD4P46934 1319 aa12.57□□□□□ -0.4
DDX39A-203ENST00000454233 RAD50Q92878 1312 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms