RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 LRRN4CLQ8ND94 238 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 COX4I2Q96KJ9 171 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 FGD4Q96M96 766 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 AARSD1Q9BTE6 412 aaKnown RBP5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 DUSP23Q9BVJ7 150 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 NCOA5Q9HCD5 579 aaKnown RBP5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 NOP58Q9Y2X3 529 aaKnown RBP5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 EMC9Q9Y3B6 208 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 CD2APQ9Y5K6 639 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 COL4A3BPQ9Y5P4 624 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 DNAJC25-GNG10A0A024R161 153 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 ITGA4P13612 1032 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 L1CAMP32004 1257 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 ZNF445P59923 1031 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 TM4SF20Q53R12 229 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 FAM209AQ5JX71 171 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 YOD1Q5VVQ6 348 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 INTS5Q6P9B9 1019 aaKnown RBP5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 ADAT2Q7Z6V5 191 aaKnown RBP5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 TRIM59Q8IWR1 403 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 FBXL6Q8N531 539 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 SYTL5Q8TDW5 730 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 GATA6Q92908 595 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 NINJ1Q92982 152 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 CHMP4AQ9BY43 222 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 CWC22Q9HCG8 908 aaKnown RBP5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 PCDH12Q9NPG4 1184 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 MRPS23Q9Y3D9 190 aaKnown RBP5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 PCDHB12Q9Y5F1 795 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 FHOD1Q9Y613 1164 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 CNTNAP4Q9C0A0 1308 aa5.36□□□□□ -1.55
HMGB1P15-201ENST00000453854 TRBV23-1A0A0A0MS06 115 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 PLD2O14939 933 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 TBX1O43435 398 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 KCNQ2O43526 872 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 PABPC1P11940 636 aaKnown RBP5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 TAL1P17542 331 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 IBSPP21815 317 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 CYP7A1P22680 504 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 RXRBP28702 533 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 ADMP35318 185 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 GRIK1P39086 918 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 GRIA2P42262 883 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 IGBP1P78318 339 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 AMPD3Q01432 767 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 CDK5R2Q13319 367 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 FNDC3BQ53EP0 1204 aaKnown RBP5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 POMZP3Q6PJE2 187 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 C22orf34Q6ZV56 151 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 OSBP2Q969R2 916 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 LGR4Q9BXB1 951 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 MRPL4Q9BYD3 311 aaKnown RBP5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 PRDM14Q9GZV8 571 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 LGR6Q9HBX8 967 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 LRP2BPQ9P2M1 347 aa5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 CGGBP1Q9UFW8 167 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 DIS3Q9Y2L1 958 aaKnown RBP5.35□□□□□ -1.55
HMGB1P15-201ENST00000453854 NISCHQ9Y2I1 1504 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 hCG_2014768A0A024R1R8 64 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 LEFTY1O75610 366 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 IRAK1P51617 712 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 PABPC4Q13310 644 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 GRB10Q13322 594 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 SNW1Q13573 536 aaKnown RBP5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 CBX2Q14781 532 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 TRIM61Q5EBN2 209 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 PAOXQ6QHF9 649 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 NSMFQ6X4W1 530 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 NFXL1Q6ZNB6 911 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 KRT26Q7Z3Y9 468 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 CRACR2BQ8N4Y2 399 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 TOP6BLQ8N6T0 577 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 MFSD3Q96ES6 412 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 Q96M66 194 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 CDC6Q99741 560 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 PIM2Q9P1W9 311 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 AKT3Q9Y243 479 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 SUGT1Q9Y2Z0 365 aa5.34□□□□□ -1.55
HMGB1P15-201ENST00000453854 A0A087X0B3 334 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 IGF2BP3O00425 579 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 NOP56O00567 594 aaKnown RBP5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 LRRN2O75325 713 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 SCG5P05408 212 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 C6orf222P0C671 652 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 KIR3DL1P43629 444 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 SUMO1P63165 101 aaKnown RBP5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 NFKBIBQ15653 356 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 MSMPQ1L6U9 139 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 OGFOD3Q6PK18 319 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 NIM1KQ8IY84 436 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 RPUSD2Q8IZ73 545 aaKnown RBP5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 DTWD2Q8NBA8 298 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 GIMAP7Q8NHV1 300 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 CCDC140Q96MF4 163 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 CLUHP3Q96NS8 147 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 NKX2-4Q9H2Z4 354 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 FBXL21Q9UKT6 434 aa5.33□□□□□ -1.56
HMGB1P15-201ENST00000453854 RBAK-RBAKDNI3L0D1 243 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms