RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 CRISPLD2Q9H0B8 497 aa19.01■□□□□ 0.63
SCAMP4-205ENST00000452128 ZNF536O15090 1300 aa19■□□□□ 0.63
SCAMP4-205ENST00000452128 MYH4Q9Y623 1939 aa19■□□□□ 0.63
SCAMP4-205ENST00000452128 B4E1Z4 1266 aa19■□□□□ 0.63
SCAMP4-205ENST00000452128 TMEM232C9JQI7 657 aa19■□□□□ 0.63
SCAMP4-205ENST00000452128 KDM4AO75164 1064 aa19■□□□□ 0.63
SCAMP4-205ENST00000452128 SLC1A4P43007 532 aa19■□□□□ 0.63
SCAMP4-205ENST00000452128 ERICH6BQ5W0A0 696 aa19■□□□□ 0.63
SCAMP4-205ENST00000452128 TRMT44Q8IYL2 757 aaKnown RBP19■□□□□ 0.63
SCAMP4-205ENST00000452128 RNF208Q9H0X6 261 aa19■□□□□ 0.63
SCAMP4-205ENST00000452128 TOMM22Q9NS69 142 aa19■□□□□ 0.63
SCAMP4-205ENST00000452128 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
SCAMP4-205ENST00000452128 PDHBP11177 359 aa18.99■□□□□ 0.63
SCAMP4-205ENST00000452128 ADORA2AP29274 412 aa18.99■□□□□ 0.63
SCAMP4-205ENST00000452128 STOX1Q6ZVD7 989 aa18.99■□□□□ 0.63
SCAMP4-205ENST00000452128 FAM160B2Q86V87 743 aa18.99■□□□□ 0.63
SCAMP4-205ENST00000452128 CCAR1Q8IX12 1150 aaKnown RBP18.99■□□□□ 0.63
SCAMP4-205ENST00000452128 CHURC1Q8WUH1 139 aa18.99■□□□□ 0.63
SCAMP4-205ENST00000452128 DCAF4Q8WV16 495 aa18.99■□□□□ 0.63
SCAMP4-205ENST00000452128 TEX13BQ9BXU2 312 aa18.99■□□□□ 0.63
SCAMP4-205ENST00000452128 BIN2Q9UBW5 565 aaPredicted RBP18.99■□□□□ 0.63
SCAMP4-205ENST00000452128 LAMA4Q16363 1823 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 SGPL1O95470 568 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 FDX1P10109 184 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 OAZ1P54368 228 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 CACNB2Q08289 660 aaPredicted RBP18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 PLS1Q14651 629 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 SEC23AQ15436 765 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 TTBK2Q6IQ55 1244 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 SAMD1Q6SPF0 538 aaPredicted RBP18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 KCTD1Q719H9 257 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 CYB5R4Q7L1T6 521 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 NCAPG2Q86XI2 1143 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 ENAHQ8N8S7 591 aaPredicted RBP18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 KIFC2Q96AC6 838 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 ZKSCAN3Q9BRR0 538 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 KRT23Q9C075 422 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 RPTORQ8N122 1335 aa18.98■□□□□ 0.63
SCAMP4-205ENST00000452128 PDE4DIPQ5VU43 2346 aa18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 DNAJC25-GNG10A0A024R161 153 aa18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 ZBED4O75132 1171 aa18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 STAT2P52630 851 aa18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 ZNF792Q3KQV3 632 aa18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 OLFML2BQ68BL8 750 aa18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 U2AF1L4Q8WU68 220 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 ZSCAN10Q96SZ4 725 aaPredicted RBP18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 CNNM2Q9H8M5 875 aa18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 RAVER2Q9HCJ3 691 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 PRR12Q9ULL5 1215 aa18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 IVNS1ABPQ9Y6Y0 642 aa18.97■□□□□ 0.63
SCAMP4-205ENST00000452128 FCER1AP12319 257 aa18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 ZKSCAN1P17029 563 aaPredicted RBP18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 COPB2P35606 906 aa18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 MNX1P50219 401 aaPredicted RBP18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 ZNF543Q08ER8 600 aa18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 COL9A3Q14050 684 aaPredicted RBP18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 NECTIN1Q15223 517 aa18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 CCDC178Q5BJE1 867 aa18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 WDR78Q5VTH9 848 aa18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 TRPV1Q8NER1 839 aa18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.96■□□□□ 0.634e-6■■■□□ 15.2
SCAMP4-205ENST00000452128 RBM8AQ9Y5S9 174 aaKnown RBP18.96■□□□□ 0.63
SCAMP4-205ENST00000452128 ZNF236Q9UL36 1845 aa18.95■□□□□ 0.62
SCAMP4-205ENST00000452128 E7EWF7 191 aa18.95■□□□□ 0.62
SCAMP4-205ENST00000452128 PRKAR2AP13861 404 aaKnown RBP18.95■□□□□ 0.62
SCAMP4-205ENST00000452128 CAPN2P17655 700 aa18.95■□□□□ 0.62
SCAMP4-205ENST00000452128 LHX8Q68G74 356 aa18.95■□□□□ 0.62
SCAMP4-205ENST00000452128 SNRNP48Q6IEG0 339 aaKnown RBP18.95■□□□□ 0.62
SCAMP4-205ENST00000452128 CHMP4CQ96CF2 233 aa18.95■□□□□ 0.62
SCAMP4-205ENST00000452128 DIS3Q9Y2L1 958 aaKnown RBP18.95■□□□□ 0.62
SCAMP4-205ENST00000452128 COL11A1P12107 1806 aaPredicted RBP18.95■□□□□ 0.62
SCAMP4-205ENST00000452128 IQCA1Q86XH1 822 aa18.94■□□□□ 0.62
SCAMP4-205ENST00000452128 CPXCR1Q8N123 301 aa18.94■□□□□ 0.62
SCAMP4-205ENST00000452128 MAML3Q96JK9 1138 aa18.94■□□□□ 0.62
SCAMP4-205ENST00000452128 FGD4Q96M96 766 aa18.94■□□□□ 0.62
SCAMP4-205ENST00000452128 AGBL1Q96MI9 1066 aa18.94■□□□□ 0.62
SCAMP4-205ENST00000452128 DEFB118Q96PH6 123 aa18.94■□□□□ 0.62
SCAMP4-205ENST00000452128 RANBP17Q9H2T7 1088 aaKnown RBP18.94■□□□□ 0.62
SCAMP4-205ENST00000452128 HMX1Q9NP08 348 aaPredicted RBP18.94■□□□□ 0.62
SCAMP4-205ENST00000452128 PPP4R2Q9NY27 417 aa18.94■□□□□ 0.62
SCAMP4-205ENST00000452128 NEFLP07196 543 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 CCND3P30281 292 aaPredicted RBP18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 SLC16A2P36021 539 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 ANTXR2P58335 489 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 SNAP25P60880 206 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 DPP9Q86TI2 863 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 MB21D2Q8IYB1 491 aaPredicted RBP18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 PNMA1Q8ND90 353 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 CHST13Q8NET6 341 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 MMP19Q99542 508 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 OGDHLQ9ULD0 1010 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 TNKSO95271 1327 aa18.93■□□□□ 0.62
SCAMP4-205ENST00000452128 SLC27A2O14975 620 aa18.92■□□□□ 0.62
SCAMP4-205ENST00000452128 PGK2P07205 417 aa18.92■□□□□ 0.62
SCAMP4-205ENST00000452128 CYBAP13498 195 aa18.92■□□□□ 0.62
SCAMP4-205ENST00000452128 CYP2C19P33261 490 aa18.92■□□□□ 0.62
SCAMP4-205ENST00000452128 SYDE2Q5VT97 1194 aa18.92■□□□□ 0.62
SCAMP4-205ENST00000452128 IGDCC4Q8TDY8 1250 aa18.92■□□□□ 0.62
SCAMP4-205ENST00000452128 SENP2Q9HC62 589 aa18.92■□□□□ 0.62
SCAMP4-205ENST00000452128 CWC22Q9HCG8 908 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms