RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 PTPRUQ92729 1446 aa9.65□□□□□ -0.87
NUCKS1P1-201ENST00000452067 PRNPP04156 253 aa9.64□□□□□ -0.87
NUCKS1P1-201ENST00000452067 CAMK2GQ13555 558 aaPredicted RBP9.64□□□□□ -0.87
NUCKS1P1-201ENST00000452067 ARMCX6Q7L4S7 300 aa9.64□□□□□ -0.87
NUCKS1P1-201ENST00000452067 ERMP1Q7Z2K6 904 aa9.64□□□□□ -0.87
NUCKS1P1-201ENST00000452067 PRDM10Q9NQV6 1147 aa9.64□□□□□ -0.87
NUCKS1P1-201ENST00000452067 U3KQE9 123 aa9.64□□□□□ -0.87
NUCKS1P1-201ENST00000452067 SHPRHQ149N8 1683 aa9.64□□□□□ -0.87
NUCKS1P1-201ENST00000452067 CPSF1Q10570 1443 aaKnown RBP9.64□□□□□ -0.87
NUCKS1P1-201ENST00000452067 PF4P02776 101 aa9.63□□□□□ -0.87
NUCKS1P1-201ENST00000452067 ETF1P62495 437 aaKnown RBP9.63□□□□□ -0.87
NUCKS1P1-201ENST00000452067 RPL6Q02878 288 aaKnown RBP9.63□□□□□ -0.87
NUCKS1P1-201ENST00000452067 SLBPQ14493 270 aaKnown RBP eCLIP9.63□□□□□ -0.87
NUCKS1P1-201ENST00000452067 BNC2Q6ZN30 1099 aaPredicted RBP9.63□□□□□ -0.87
NUCKS1P1-201ENST00000452067 JARID2Q92833 1246 aaPredicted RBP9.63□□□□□ -0.87
NUCKS1P1-201ENST00000452067 ANKARQ7Z5J8 1434 aa9.63□□□□□ -0.87
NUCKS1P1-201ENST00000452067 FMN2Q9NZ56 1722 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 RBM47A0AV96 593 aaKnown RBP9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 LRIG2O94898 1065 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 GRK4P32298 578 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 GBP2P32456 591 aaPredicted RBP9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 CAP2P40123 477 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 PWP1Q13610 501 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 NKG7Q16617 165 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 LDLRAD1Q5T700 205 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 FAM214BQ7L5A3 538 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 RELL1Q8IUW5 271 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 FAM181AQ8N9Y4 354 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 SLC26A8Q96RN1 970 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 BCL11AQ9H165 835 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 BSDC1Q9NW68 430 aaPredicted RBP9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 NUDCQ9Y266 331 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 NPHP4O75161 1426 aaPredicted RBP9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 NWD1Q149M9 1564 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 NRKQ7Z2Y5 1582 aa9.62□□□□□ -0.87
NUCKS1P1-201ENST00000452067 FAM221AA4D161 298 aa9.61□□□□□ -0.87
NUCKS1P1-201ENST00000452067 CILPO75339 1184 aa9.61□□□□□ -0.87
NUCKS1P1-201ENST00000452067 ERICH6BQ5W0A0 696 aa9.61□□□□□ -0.87
NUCKS1P1-201ENST00000452067 NFXL1Q6ZNB6 911 aa9.61□□□□□ -0.87
NUCKS1P1-201ENST00000452067 HID1Q8IV36 788 aa9.61□□□□□ -0.87
NUCKS1P1-201ENST00000452067 COPRSQ9NQ92 184 aa9.61□□□□□ -0.87
NUCKS1P1-201ENST00000452067 KBTBD4Q9NVX7 518 aa9.61□□□□□ -0.87
NUCKS1P1-201ENST00000452067 CCDC39Q9UFE4 941 aa9.61□□□□□ -0.87
NUCKS1P1-201ENST00000452067 MAP2P11137 1827 aaKnown RBP9.61□□□□□ -0.87
NUCKS1P1-201ENST00000452067 WNT11O96014 354 aa9.6□□□□□ -0.87
NUCKS1P1-201ENST00000452067 F13A1P00488 732 aa9.6□□□□□ -0.87
NUCKS1P1-201ENST00000452067 VSIG10LQ86VR7 867 aa9.6□□□□□ -0.87
NUCKS1P1-201ENST00000452067 GATAD2BQ8WXI9 593 aa9.6□□□□□ -0.87
NUCKS1P1-201ENST00000452067 HEXIM2Q96MH2 286 aaKnown RBP9.6□□□□□ -0.87
NUCKS1P1-201ENST00000452067 FOXQ1Q9C009 403 aa9.6□□□□□ -0.87
NUCKS1P1-201ENST00000452067 FYB1O15117 783 aa9.59□□□□□ -0.87
NUCKS1P1-201ENST00000452067 GARTP22102 1010 aa9.59□□□□□ -0.87
NUCKS1P1-201ENST00000452067 GP2P55259 537 aaKnown RBP9.59□□□□□ -0.87
NUCKS1P1-201ENST00000452067 MKNK2Q9HBH9 465 aa9.59□□□□□ -0.87
NUCKS1P1-201ENST00000452067 NALCNQ8IZF0 1738 aa9.59□□□□□ -0.87
NUCKS1P1-201ENST00000452067 RGPD8O14715 1765 aaPredicted RBP9.58□□□□□ -0.88
NUCKS1P1-201ENST00000452067 SLITRK5O94991 958 aa9.58□□□□□ -0.88
NUCKS1P1-201ENST00000452067 EOMESO95936 686 aa9.58□□□□□ -0.88
NUCKS1P1-201ENST00000452067 OXCT1P55809 520 aa9.58□□□□□ -0.88
NUCKS1P1-201ENST00000452067 FAM160A1Q05DH4 1040 aa9.58□□□□□ -0.88
NUCKS1P1-201ENST00000452067 PLD6Q8N2A8 252 aaKnown RBP9.58□□□□□ -0.88
NUCKS1P1-201ENST00000452067 OAS3Q9Y6K5 1087 aaKnown RBP9.58□□□□□ -0.88
NUCKS1P1-201ENST00000452067 NKTRP30414 1462 aaKnown RBP9.58□□□□□ -0.88
NUCKS1P1-201ENST00000452067 LRRC7Q96NW7 1537 aa9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 MINDY4BA8MYZ0 360 aa9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 CST3P01034 146 aaPredicted RBP9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 PGRP06401 933 aa9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 MTHFSP49914 203 aa9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 NETO1Q8TDF5 533 aa9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 PNNQ9H307 717 aaKnown RBP9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 KCNQ5Q9NR82 932 aa9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 TJP2Q9UDY2 1190 aa9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 ANGEL1Q9UNK9 670 aaKnown RBP9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 SUPT16HQ9Y5B9 1047 aaKnown RBP9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 AATKQ6ZMQ8 1374 aa9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 USP54Q70EL1 1684 aa9.57□□□□□ -0.88
NUCKS1P1-201ENST00000452067 TTC21AQ8NDW8 1320 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 USP6P35125 1406 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 ADGRL3Q9HAR2 1447 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 CDK12Q9NYV4 1490 aaPredicted RBP9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 BPNT1O95861 308 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 KCNA6P17658 529 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 PDE4BQ07343 736 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 SNAP47Q5SQN1 464 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 PRAMEF13Q5VWM6 474 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 HS2ST1Q7LGA3 356 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 MRPL41Q8IXM3 137 aaKnown RBP9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 MFSD2AQ8NA29 543 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 GOLM1Q8NBJ4 401 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 COG3Q96JB2 828 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 GTF2IRD1Q9UHL9 959 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 GGT7Q9UJ14 662 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 CORINQ9Y5Q5 1042 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 PRR36Q9H6K5 1346 aa9.56□□□□□ -0.88
NUCKS1P1-201ENST00000452067 COL3A1P02461 1466 aaPredicted RBP9.55□□□□□ -0.88
NUCKS1P1-201ENST00000452067 PNPLA6Q8IY17 1366 aa9.55□□□□□ -0.88
NUCKS1P1-201ENST00000452067 CEACAM5P06731 702 aa9.55□□□□□ -0.88
NUCKS1P1-201ENST00000452067 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
NUCKS1P1-201ENST00000452067 TMEM87BQ96K49 555 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms