RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 EBF1Q9UH73 591 aa7.03□□□□□ -1.28
GTF3C3-207ENST00000451088 CUX1P39880 1505 aa7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 SIGLEC6O43699 453 aa7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 JAG1P78504 1218 aa7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 DUSP4Q13115 394 aa7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 KSR1Q8IVT5 923 aa7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 LINC00116Q8NCU8 138 aa7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 TCTN2Q96GX1 697 aa7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 ZNF512BQ96KM6 892 aaPredicted RBP7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 G6PC3Q9BUM1 346 aa7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 PPRC1Q5VV67 1664 aaKnown RBP7.02□□□□□ -1.29
GTF3C3-207ENST00000451088 PRAMEF1O95521 474 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 TRHRP34981 398 aaPredicted RBP7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 CHRNEQ04844 493 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 TIGD5Q53EQ6 642 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 SPPL2CQ8IUH8 684 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 ZNF654Q8IZM8 581 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 ANKS4BQ8N8V4 417 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 SYTL4Q96C24 671 aaPredicted RBP7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 MRRFQ96E11 262 aaKnown RBP7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 SLC38A3Q99624 504 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 TM9SF2Q99805 663 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 RNF32Q9H0A6 362 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 C19orf44Q9H6X5 657 aa7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 SUCOQ9UBS9 1254 aaKnown RBP7.01□□□□□ -1.29
GTF3C3-207ENST00000451088 BTBD11A6QL63 1104 aa7□□□□□ -1.29
GTF3C3-207ENST00000451088 FZD5Q13467 585 aa7□□□□□ -1.29
GTF3C3-207ENST00000451088 COL9A2Q14055 689 aaPredicted RBP7□□□□□ -1.29
GTF3C3-207ENST00000451088 ZNF124Q15973 351 aa7□□□□□ -1.29
GTF3C3-207ENST00000451088 FERD3LQ96RJ6 166 aa7□□□□□ -1.29
GTF3C3-207ENST00000451088 MKRN2Q9H000 416 aaKnown RBP7□□□□□ -1.29
GTF3C3-207ENST00000451088 PRR13Q9NZ81 148 aa7□□□□□ -1.29
GTF3C3-207ENST00000451088 KIAA1522Q9P206 1035 aaPredicted RBP7□□□□□ -1.29
GTF3C3-207ENST00000451088 TCFL5Q9UL49 500 aa7□□□□□ -1.29
GTF3C3-207ENST00000451088 ABCA5Q8WWZ7 1642 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 TMEM82A0PJX8 343 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 PCBP3P57721 371 aaKnown RBP6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 PAK2Q13177 524 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 AUHQ13825 339 aaKnown RBP6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 SNX17Q15036 470 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 PKN1Q16512 942 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 BBS9Q3SYG4 887 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 RGS22Q8NE09 1264 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 DHRS1Q96LJ7 313 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 DIRC2Q96SL1 478 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 FOXP3Q9BZS1 431 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 PPT2Q9UMR5 302 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 PCDHB12Q9Y5F1 795 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 ABCA10Q8WWZ4 1543 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 FHAD1B1AJZ9 1412 aa6.99□□□□□ -1.29
GTF3C3-207ENST00000451088 UNCXA6NJT0 531 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 DBX1A6NMT0 343 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 NOTOA8MTQ0 251 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 SHOXO15266 292 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 TSPAN15O95858 294 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 HDLBPQ00341 1268 aaKnown RBP6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 CILP2Q8IUL8 1156 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 FBXO15Q8NCQ5 510 aaPredicted RBP6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 RASGRP4Q8TDF6 673 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 SHISA4Q96DD7 197 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 SPATA32Q96LK8 384 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 PPP1R16BQ96T49 567 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 NSUN3Q9H649 340 aaKnown RBP6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 CWC22Q9HCG8 908 aaKnown RBP6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 CHST7Q9NS84 486 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 MINPP1Q9UNW1 487 aa6.98□□□□□ -1.29
GTF3C3-207ENST00000451088 C9IYK1 514 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 KRT1P04264 644 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 GLI2P10070 1586 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 GUCY2CP25092 1073 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 RPL10P27635 214 aaKnown RBP6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 SOX9P48436 509 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 PMS1P54277 932 aaKnown RBP6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 WAPLQ7Z5K2 1190 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 LSRQ86X29 649 aaPredicted RBP6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 MAP6Q96JE9 813 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 EPB41L4BQ9H329 900 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 GINM1Q9NU53 330 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 GFOD1Q9NXC2 390 aa6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 YBX2Q9Y2T7 364 aaKnown RBP6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 TTBK1Q5TCY1 1321 aaPredicted RBP6.97□□□□□ -1.29
GTF3C3-207ENST00000451088 ASXL2Q76L83 1435 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 SYPP08247 313 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 CTSKP43235 329 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 KIR2DL1P43626 348 aaPredicted RBP6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 KIR2DL2P43627 348 aaPredicted RBP6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 GJA8P48165 433 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 HSPA2P54652 639 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 ANKRD39Q53RE8 183 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 UNC5AQ6ZN44 842 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 RUFY4Q6ZNE9 571 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 SYDE1Q6ZW31 735 aaPredicted RBP6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 PPFIBP1Q86W92 1011 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 NT5DC4Q86YG4 428 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 IRF2BP1Q8IU81 584 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 SMARCC1Q92922 1105 aaPredicted RBP6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 SLC6A17Q9H1V8 727 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 DCP1AQ9NPI6 582 aaPredicted RBP6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 FBXL21Q9UKT6 434 aa6.96□□□□□ -1.3
GTF3C3-207ENST00000451088 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms