RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ISY1Q9ULR0 285 aaKnown RBP20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 ZNF236Q9UL36 1845 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 CEP290O15078 2479 aa20.13■□□□□ 0.81
PRPF40A-204ENST00000450303 ALPK3Q96L96 1907 aa20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 CCDC171Q6TFL3 1326 aa20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 FCER1AP12319 257 aa20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 HAND2P61296 217 aa20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 RRP12Q5JTH9 1297 aaKnown RBP20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 ANKLE1Q8NAG6 615 aa20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 PRPF38AQ8NAV1 312 aaKnown RBP20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 TRPV1Q8NER1 839 aa20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 MMP19Q99542 508 aa20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 IL17RBQ9NRM6 502 aa20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 STX8Q9UNK0 236 aa20.12■□□□□ 0.81
PRPF40A-204ENST00000450303 PGK2P07205 417 aa20.11■□□□□ 0.81
PRPF40A-204ENST00000450303 CPXCR1Q8N123 301 aa20.11■□□□□ 0.81
PRPF40A-204ENST00000450303 GMCL1P1Q8NEA9 526 aa20.11■□□□□ 0.81
PRPF40A-204ENST00000450303 NBPF3Q9H094 633 aa20.11■□□□□ 0.81
PRPF40A-204ENST00000450303 MTMR7Q9Y216 660 aa20.11■□□□□ 0.81
PRPF40A-204ENST00000450303 EVI5O60447 810 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 ZBED4O75132 1171 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 BMP3P12645 472 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 PRAMEF19Q5SWL8 479 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 SNRNP48Q6IEG0 339 aaKnown RBP20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 KIAA1211Q6ZU35 1233 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 ABRAQ8N0Z2 381 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 ESYT1Q9BSJ8 1104 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 C11orf49Q9H6J7 331 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 RAVER2Q9HCJ3 691 aaKnown RBP20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 SLC5A4Q9NY91 659 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 FEM1BQ9UK73 627 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 COLQQ9Y215 455 aaPredicted RBP20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 RIPK3Q9Y572 518 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 CTDP1Q9Y5B0 961 aaPredicted RBP20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 FRMPD3Q5JV73 1810 aa20.1■□□□□ 0.81
PRPF40A-204ENST00000450303 PLXNA1Q9UIW2 1896 aa20.09■□□□□ 0.81
PRPF40A-204ENST00000450303 TMEM232C9JQI7 657 aa20.09■□□□□ 0.81
PRPF40A-204ENST00000450303 ORC4O43929 436 aa20.09■□□□□ 0.81
PRPF40A-204ENST00000450303 IGHA2P01877 340 aa20.09■□□□□ 0.81
PRPF40A-204ENST00000450303 MCCP23508 829 aa20.09■□□□□ 0.81
PRPF40A-204ENST00000450303 OLFML2BQ68BL8 750 aa20.09■□□□□ 0.81
PRPF40A-204ENST00000450303 MAML3Q96JK9 1138 aa20.09■□□□□ 0.81
PRPF40A-204ENST00000450303 SYNPO2Q9UMS6 1093 aa20.09■□□□□ 0.81
PRPF40A-204ENST00000450303 NR2E3Q9Y5X4 410 aa20.09■□□□□ 0.81
PRPF40A-204ENST00000450303 SGSM2O43147 1006 aa20.08■□□□□ 0.81
PRPF40A-204ENST00000450303 REC8O95072 547 aa20.08■□□□□ 0.81
PRPF40A-204ENST00000450303 CYBAP13498 195 aa20.08■□□□□ 0.81
PRPF40A-204ENST00000450303 KCTD2Q14681 263 aa20.08■□□□□ 0.81
PRPF40A-204ENST00000450303 HABP4Q5JVS0 413 aaKnown RBP20.08■□□□□ 0.81
PRPF40A-204ENST00000450303 ANO1Q5XXA6 986 aa20.08■□□□□ 0.81
PRPF40A-204ENST00000450303 RASGRP2Q7LDG7 609 aa20.08■□□□□ 0.81
PRPF40A-204ENST00000450303 TEX13BQ9BXU2 312 aa20.08■□□□□ 0.81
PRPF40A-204ENST00000450303 DDX20Q9UHI6 824 aaKnown RBP20.08■□□□□ 0.81
PRPF40A-204ENST00000450303 FGRP09769 529 aa20.07■□□□□ 0.8
PRPF40A-204ENST00000450303 SLC1A4P43007 532 aa20.07■□□□□ 0.8
PRPF40A-204ENST00000450303 IKQ13123 557 aaPredicted RBP20.07■□□□□ 0.8
PRPF40A-204ENST00000450303 C8orf34Q49A92 452 aa20.07■□□□□ 0.8
PRPF40A-204ENST00000450303 CHRDL2Q6WN34 429 aa20.07■□□□□ 0.8
PRPF40A-204ENST00000450303 KCTD1Q719H9 257 aa20.07■□□□□ 0.8
PRPF40A-204ENST00000450303 SLC38A10Q9HBR0 1119 aa20.07■□□□□ 0.8
PRPF40A-204ENST00000450303 COPB2P35606 906 aa20.06■□□□□ 0.8
PRPF40A-204ENST00000450303 PPP4R3BQ5MIZ7 849 aa20.06■□□□□ 0.8
PRPF40A-204ENST00000450303 C7orf61Q8IZ16 206 aa20.06■□□□□ 0.8
PRPF40A-204ENST00000450303 GMCL1Q96IK5 515 aa20.06■□□□□ 0.8
PRPF40A-204ENST00000450303 SMCHD1A6NHR9 2005 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 PFASO15067 1338 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 ZMYM6O95789 1325 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 SLC34A2O95436 690 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 SNAP25P60880 206 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 ZNF792Q3KQV3 632 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 AKNAD1Q5T1N1 836 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 MFSD6Q6ZSS7 791 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 TBC1D10CQ8IV04 446 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 STAG1Q8WVM7 1258 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 DDX11Q96FC9 970 aa20.05■□□□□ 0.8
PRPF40A-204ENST00000450303 ANP32AP39687 249 aaKnown RBP20.04■□□□□ 0.8
PRPF40A-204ENST00000450303 STAT2P52630 851 aa20.04■□□□□ 0.8
PRPF40A-204ENST00000450303 RCSD1Q6JBY9 416 aa20.04■□□□□ 0.8
PRPF40A-204ENST00000450303 CHURC1Q8WUH1 139 aa20.04■□□□□ 0.8
PRPF40A-204ENST00000450303 ZNF213O14771 459 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 ATP2A1O14983 1001 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 MSCO60682 206 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 MYCNP04198 464 aaPredicted RBP20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 COL6A1P12109 1028 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 NOVP48745 357 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 CCDC96Q2M329 555 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 GJC2Q5T442 439 aaPredicted RBP20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 FAM160B2Q86V87 743 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 AGBL1Q96MI9 1066 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 TMEM47Q9BQJ4 181 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 TINF2Q9BSI4 451 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 UPF2Q9HAU5 1272 aaKnown RBP20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 ANO2Q9NQ90 1003 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 HOMER2Q9NSB8 354 aa20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 ZMYND8Q9ULU4 1186 aaPredicted RBP20.03■□□□□ 0.8
PRPF40A-204ENST00000450303 SEPT4O43236 478 aa20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 EPB41L2O43491 1005 aaKnown RBP20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 TAL1P17542 331 aaPredicted RBP20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 TTBK2Q6IQ55 1244 aa20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 CCDC174Q6PII3 467 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms