RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCN5A-208ENST00000450102 KDM3AQ9Y4C1 1321 aa11.9□□□□□ -0.5
SCN5A-208ENST00000450102 K7ENM7 598 aa11.9□□□□□ -0.5
SCN5A-208ENST00000450102 XRCC5P13010 732 aaKnown RBP11.9□□□□□ -0.5
SCN5A-208ENST00000450102 KRT10P13645 584 aa11.9□□□□□ -0.5
SCN5A-208ENST00000450102 TNFAIP1Q13829 316 aa11.9□□□□□ -0.5
SCN5A-208ENST00000450102 TBCCQ15814 346 aa11.9□□□□□ -0.5
SCN5A-208ENST00000450102 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
SCN5A-208ENST00000450102 MORC4Q8TE76 937 aa11.9□□□□□ -0.5
SCN5A-208ENST00000450102 DCPSQ96C86 337 aaKnown RBP11.9□□□□□ -0.5
SCN5A-208ENST00000450102 HECW1Q76N89 1606 aa11.9□□□□□ -0.51
SCN5A-208ENST00000450102 TAF5LO75529 589 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 SRGAP2BP0DMP2 458 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 STX1BP61266 288 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 TTC30AQ86WT1 665 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 XAGE2Q96GT9 111 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 TTC1Q99614 292 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 USP40Q9NVE5 1235 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 THAP12O43422 761 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 RNF8O76064 485 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 BFSP1Q12934 665 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 DISC1Q9NRI5 854 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 CPSF3Q9UKF6 684 aaKnown RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 KIAA1841Q6NSI8 718 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 C2CD5Q86YS7 1000 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 RNF168Q8IYW5 571 aaPredicted RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 REXO1Q8N1G1 1221 aaKnown RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 MYL10Q9BUA6 226 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 NCOA5Q9HCD5 579 aaKnown RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 NOS1P29475 1434 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 SART1O43290 800 aaKnown RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 GPAA1O43292 621 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 ALDH1B1P30837 517 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 MYSM1Q5VVJ2 828 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 OTUD7BQ6GQQ9 843 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 METTL23Q86XA0 190 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 CCDC124Q96CT7 223 aaKnown RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 KRT82Q9NSB4 513 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 KRIT1O00522 736 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 CPA1P15085 419 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 FOXD4Q12950 439 aaPredicted RBP11.89□□□□□ -0.51
SCN5A-208ENST00000450102 POSTNQ15063 836 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
SCN5A-208ENST00000450102 KCNK3O14649 394 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 POLGP54098 1239 aaPredicted RBP11.88□□□□□ -0.51
SCN5A-208ENST00000450102 RNASELQ05823 741 aaKnown RBP11.88□□□□□ -0.51
SCN5A-208ENST00000450102 ARPP19P56211 112 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 NLRP12P59046 1061 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 PDE1BQ01064 536 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.88□□□□□ -0.51
SCN5A-208ENST00000450102 GDAP1Q8TB36 358 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 STAMQ92783 540 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 HOMER3Q9NSC5 361 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 LRRIQ4A6NIV6 560 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 EYA2O00167 538 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 PIK3CAP42336 1068 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 CDC26Q8NHZ8 85 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
SCN5A-208ENST00000450102 GOLGA8QA0A0J9YX86 632 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 GOLGA8OA6NCC3 632 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 GOLGA8NF8WBI6 632 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 APPBP2Q92624 585 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 H0YCG3 227 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 ATF2P15336 505 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 TFAP4Q01664 338 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 PTPROQ16827 1216 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 SMC5Q8IY18 1101 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 PRPF38AQ8NAV1 312 aaKnown RBP11.88□□□□□ -0.51
SCN5A-208ENST00000450102 PHKBQ93100 1093 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 SLC8A2Q9UPR5 921 aa11.88□□□□□ -0.51
SCN5A-208ENST00000450102 SMCO2A6NFE2 343 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 N4BP1O75113 896 aaKnown RBP11.87□□□□□ -0.51
SCN5A-208ENST00000450102 HIP1RO75146 1068 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 YWHAGP61981 247 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCN5A-208ENST00000450102 MICAL1Q8TDZ2 1067 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 SNX21Q969T3 373 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 SLC12A6Q9UHW9 1150 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 LMTK3Q96Q04 1460 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 XPOTO43592 962 aaKnown RBP11.87□□□□□ -0.51
SCN5A-208ENST00000450102 NPR1P16066 1061 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 CHMLP26374 656 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 CLCN1P35523 988 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 DMP1Q13316 513 aaPredicted RBP11.87□□□□□ -0.51
SCN5A-208ENST00000450102 FAM47AQ5JRC9 791 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 FAM160B1Q5W0V3 765 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 DPP9Q86TI2 863 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCN5A-208ENST00000450102 CCDC138Q96M89 665 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 NRBP2Q9NSY0 501 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 PPP1R9AQ9ULJ8 1098 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
SCN5A-208ENST00000450102 ZNF148Q9UQR1 794 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 MRC2Q9UBG0 1479 aa11.87□□□□□ -0.51
SCN5A-208ENST00000450102 SYF2O95926 243 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms