RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 HAUS7Q99871 368 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 MKNK2Q9HBH9 465 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 ZNF214Q9UL59 606 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-211ENST00000449757 DDX19BQ9UMR2 479 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 DIS3Q9Y2L1 958 aaKnown RBP12.35□□□□□ -0.43
DDX39B-211ENST00000449757 COG6Q9Y2V7 657 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 TTC28Q96AY4 2481 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
DDX39B-211ENST00000449757 MINDY4BA8MYZ0 360 aa12.34□□□□□ -0.43
DDX39B-211ENST00000449757 KIAA0355O15063 1070 aa12.34□□□□□ -0.43
DDX39B-211ENST00000449757 C6orf222P0C671 652 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-211ENST00000449757 ATP5JP18859 108 aa12.34□□□□□ -0.43
DDX39B-211ENST00000449757 ACLYP53396 1101 aa12.34□□□□□ -0.43
DDX39B-211ENST00000449757 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
DDX39B-211ENST00000449757 CPXCR1Q8N123 301 aa12.34□□□□□ -0.43
DDX39B-211ENST00000449757 REPS2Q8NFH8 660 aa12.34□□□□□ -0.43
DDX39B-211ENST00000449757 PUS7LQ9H0K6 701 aaKnown RBP12.34□□□□□ -0.43
DDX39B-211ENST00000449757 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
DDX39B-211ENST00000449757 ADAMTS5Q9UNA0 930 aa12.34□□□□□ -0.43
DDX39B-211ENST00000449757 TMEM265A0A087WTH1 108 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 ZBED4O75132 1171 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 ADAMTS4O75173 837 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 DNAJB2P25686 324 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 CCDC129Q6ZRS4 1044 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 SIRT2Q8IXJ6 389 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 KIFC2Q96AC6 838 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
DDX39B-211ENST00000449757 SPC25Q9HBM1 224 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 LRRC37A2A6NM11 1700 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 SYNGAP1Q96PV0 1343 aa12.33□□□□□ -0.44
DDX39B-211ENST00000449757 MYADML2A6NDP7 307 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
DDX39B-211ENST00000449757 NDUFB10O96000 172 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 TDO2P48775 406 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 FAAP100Q0VG06 881 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 KCNA10Q16322 511 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
DDX39B-211ENST00000449757 PPM1EQ8WY54 764 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 GLT1D1Q96MS3 346 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 PPP1R12CQ9BZL4 782 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 LRRCC1Q9C099 1032 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
DDX39B-211ENST00000449757 HOMER2Q9NSB8 354 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
DDX39B-211ENST00000449757 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-211ENST00000449757 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-211ENST00000449757 PRDM1O75626 825 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 TIMP1P01033 207 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 RASA1P20936 1047 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 PPIGQ13427 754 aaKnown RBP eCLIP12.31□□□□□ -0.441e-12■□□□□ 9.9
DDX39B-211ENST00000449757 GRIN2CQ14957 1233 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 CCDC174Q6PII3 467 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 NOL8Q76FK4 1167 aaKnown RBP12.31□□□□□ -0.44
DDX39B-211ENST00000449757 ANKRD33Q7Z3H0 272 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
DDX39B-211ENST00000449757 PCSK9Q8NBP7 692 aaKnown RBP12.31□□□□□ -0.44
DDX39B-211ENST00000449757 TIFAQ96CG3 184 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.31□□□□□ -0.449e-25■□□□□ 9.5
DDX39B-211ENST00000449757 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDX39B-211ENST00000449757 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-211ENST00000449757 CLIP2Q9UDT6 1046 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 RIPK3Q9Y572 518 aa12.31□□□□□ -0.44
DDX39B-211ENST00000449757 A0A0U1RQG5 324 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 F5H6K3 240 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 TLR3O15455 904 aaKnown RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 DUSP11O75319 330 aaKnown RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 SNAI1O95863 264 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 APPP05067 770 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 ASGR1P07306 291 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 KLRC3Q07444 240 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 IKQ13123 557 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 ACVR2BQ13705 512 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 ARMCX2Q7L311 632 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 PRPF38AQ8NAV1 312 aaKnown RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 KLHDC9Q8NEP7 349 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 SYMPKQ92797 1274 aaKnown RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 CHMP4CQ96CF2 233 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 TOX2Q96NM4 488 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
DDX39B-211ENST00000449757 ZNF576Q9H609 170 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 NYAP2Q9P242 653 aa12.3□□□□□ -0.44
DDX39B-211ENST00000449757 ADCY6O43306 1168 aa12.29□□□□□ -0.44
DDX39B-211ENST00000449757 ACRP10323 421 aa12.29□□□□□ -0.44
DDX39B-211ENST00000449757 CCDC144BQ3MJ40 725 aa12.29□□□□□ -0.44
DDX39B-211ENST00000449757 GNASQ5JWF2 1037 aa12.29□□□□□ -0.44
DDX39B-211ENST00000449757 TSHZ3Q63HK5 1081 aa12.29□□□□□ -0.44
DDX39B-211ENST00000449757 MFSD5Q6N075 450 aa12.29□□□□□ -0.44
DDX39B-211ENST00000449757 MAMDC4Q6UXC1 1216 aa12.29□□□□□ -0.44
DDX39B-211ENST00000449757 ZNF444Q8N0Y2 327 aaPredicted RBP12.29□□□□□ -0.44
DDX39B-211ENST00000449757 TMEM199Q8N511 208 aa12.29□□□□□ -0.44
DDX39B-211ENST00000449757 CEP95Q96GE4 821 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms