RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 ZNF467Q7Z7K2 595 aaPredicted RBP8.21□□□□□ -1.1
PBRM1-216ENST00000449505 SIAH1Q8IUQ4 282 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 SLC17A8Q8NDX2 589 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 GMCL1P1Q8NEA9 526 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 TRPV1Q8NER1 839 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 CHST13Q8NET6 341 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 NUP133Q8WUM0 1156 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 PRDM5Q9NQX1 630 aaPredicted RBP8.21□□□□□ -1.1
PBRM1-216ENST00000449505 FBXO28Q9NVF7 368 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 ISY1Q9ULR0 285 aaKnown RBP8.21□□□□□ -1.1
PBRM1-216ENST00000449505 PHF24Q9UPV7 400 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 STXBP5LQ9Y2K9 1186 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 MROH7Q68CQ1 1323 aa8.21□□□□□ -1.1
PBRM1-216ENST00000449505 CUL9Q8IWT3 2517 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 MOXD2PA6NHM9 499 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
PBRM1-216ENST00000449505 MX1P20591 662 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 STAT2P52630 851 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 IKQ13123 557 aaPredicted RBP8.2□□□□□ -1.1
PBRM1-216ENST00000449505 ZNF792Q3KQV3 632 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 TRIM60Q495X7 471 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 SLFNL1Q499Z3 407 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 C20orf194Q5TEA3 1177 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 ZNF697Q5TEC3 545 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 FAM109BQ6ICB4 259 aaPredicted RBP8.2□□□□□ -1.1
PBRM1-216ENST00000449505 CCDC174Q6PII3 467 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 SLC39A5Q6ZMH5 540 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.2□□□□□ -1.1
PBRM1-216ENST00000449505 FAM160B2Q86V87 743 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 TICAM2Q86XR7 235 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 ANKRD35Q8N283 1001 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 REPS2Q8NFH8 660 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 OSBP2Q969R2 916 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 TSEN34Q9BSV6 310 aaKnown RBP8.2□□□□□ -1.1
PBRM1-216ENST00000449505 EPB41L4AQ9HCS5 686 aaPredicted RBP8.2□□□□□ -1.1
PBRM1-216ENST00000449505 CLIP2Q9UDT6 1046 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 ZHX1Q9UKY1 873 aaPredicted RBP8.2□□□□□ -1.1
PBRM1-216ENST00000449505 FAM184BQ9ULE4 1060 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 TACC3Q9Y6A5 838 aa8.2□□□□□ -1.1
PBRM1-216ENST00000449505 COL6A3P12111 3177 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 IGKV6D-41A0A0C4DH26 115 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 ABCB7O75027 752 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 PGK2P07205 417 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 CLTBP09497 229 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 BMP3P12645 472 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 ADCYAP1R1P41586 468 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 PPARAQ07869 468 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 TKFCQ3LXA3 575 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 ANO1Q5XXA6 986 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 IFNL3Q8IZI9 196 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 PCSK9Q8NBP7 692 aaKnown RBP8.19□□□□□ -1.1
PBRM1-216ENST00000449505 NEDD1Q8NHV4 660 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 CHURC1Q8WUH1 139 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 MKL1Q969V6 931 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 KIFC2Q96AC6 838 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 GMCL1Q96IK5 515 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 GLT1D1Q96MS3 346 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 NUP88Q99567 741 aaPredicted RBP8.19□□□□□ -1.1
PBRM1-216ENST00000449505 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.19□□□□□ -1.1
PBRM1-216ENST00000449505 ABHD16BQ9H3Z7 469 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 ACAD9Q9H845 621 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 SLC38A10Q9HBR0 1119 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 STARD7Q9NQZ5 370 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 PDLIM7Q9NR12 457 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 MTMR4Q9NYA4 1195 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 PNMA2Q9UL42 364 aa8.19□□□□□ -1.1
PBRM1-216ENST00000449505 ZNFX1Q9P2E3 1918 aaKnown RBP8.19□□□□□ -1.1
PBRM1-216ENST00000449505 LAMA2P24043 3122 aaKnown RBP8.18□□□□□ -1.1
PBRM1-216ENST00000449505 TMEM265A0A087WTH1 108 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 A0A1W2PQ45 241 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-216ENST00000449505 A0A1W2PQY0 241 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 DCDC2CA8MYV0 355 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 M0R2C6 588 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 DUSP11O75319 330 aaKnown RBP8.18□□□□□ -1.1
PBRM1-216ENST00000449505 PRDM1O75626 825 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 CHGBP05060 677 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 RAG1P15918 1043 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 CST5P28325 142 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-216ENST00000449505 SLC1A4P43007 532 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 NT5C2P49902 561 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 AAMPQ13685 434 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 ZMYM1Q5SVZ6 1142 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 TSHZ3Q63HK5 1081 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 SLFN13Q68D06 897 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 MAMDC4Q6UXC1 1216 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 CPXCR1Q8N123 301 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 STK11IPQ8N1F8 1099 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 LRRC47Q8N1G4 583 aaKnown RBP8.18□□□□□ -1.1
PBRM1-216ENST00000449505 PI4K2BQ8TCG2 481 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 FERMT2Q96AC1 680 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 TOX2Q96NM4 488 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 SEZ6LQ9BYH1 1024 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 STX8Q9UNK0 236 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 SYNRGQ9UMZ2 1314 aa8.18□□□□□ -1.1
PBRM1-216ENST00000449505 DNAJC25-GNG10A0A024R161 153 aa8.17□□□□□ -1.1
PBRM1-216ENST00000449505 ASB14A6NK59 587 aa8.17□□□□□ -1.1
PBRM1-216ENST00000449505 POTEB2H3BUK9 544 aa8.17□□□□□ -1.1
PBRM1-216ENST00000449505 SMIM22K7EJ46 135 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms