RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 USP28Q96RU2 1077 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 CPVLQ9H3G5 476 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 RTEL1Q9NZ71 1219 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 PCDHA4Q9UN74 947 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 CTDP1Q9Y5B0 961 aaPredicted RBP11.12□□□□□ -0.63
RFC4-210ENST00000449502 ELP1O95163 1332 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 CCDC194A0A1B0GVG4 234 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 A0A1W2PRG0 241 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 SMCO2A6NFE2 343 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 USP17L10C9JJH3 530 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 STXBP3O00186 592 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 YEATS4O95619 227 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 ATP2B1P20020 1258 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 INPP5BP32019 993 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 STAT2P52630 851 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 PRKG1Q13976 671 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 PPP1R18Q6NYC8 613 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 LPAR1Q92633 364 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 NUP88Q99567 741 aaPredicted RBP11.11□□□□□ -0.63
RFC4-210ENST00000449502 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
RFC4-210ENST00000449502 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 TAF1DQ9H5J8 278 aaPredicted RBP11.11□□□□□ -0.63
RFC4-210ENST00000449502 JMJD4Q9H9V9 463 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.11□□□□□ -0.63
RFC4-210ENST00000449502 ZNF112Q9UJU3 913 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 CSADQ9Y600 493 aa11.11□□□□□ -0.63
RFC4-210ENST00000449502 PSME4Q14997 1843 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 MYH1P12882 1939 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 ADM5C9JUS6 153 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 BMP15O95972 392 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 ADCY7P51828 1080 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 MRPL12P52815 198 aaKnown RBP11.1□□□□□ -0.63
RFC4-210ENST00000449502 MAP3K9P80192 1104 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 NR5A1Q13285 461 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 CDC37Q16543 378 aaPredicted RBP11.1□□□□□ -0.63
RFC4-210ENST00000449502 FAM83BQ5T0W9 1011 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
RFC4-210ENST00000449502 PIK3AP1Q6ZUJ8 805 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 TMOD4Q9NZQ9 345 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 FEM1BQ9UK73 627 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 RCOR1Q9UKL0 485 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 CLIC4Q9Y696 253 aa11.1□□□□□ -0.63
RFC4-210ENST00000449502 ZNF646O15015 1829 aaPredicted RBP11.09□□□□□ -0.63
RFC4-210ENST00000449502 TRIM75PA6NK02 468 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 WDR46O15213 610 aaKnown RBP11.09□□□□□ -0.63
RFC4-210ENST00000449502 SPTLC2O15270 562 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 GADD45BO75293 160 aaPredicted RBP11.09□□□□□ -0.63
RFC4-210ENST00000449502 TRAPPC10P48553 1259 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 NASPP49321 788 aaPredicted RBP11.09□□□□□ -0.63
RFC4-210ENST00000449502 SLC35G1Q2M3R5 365 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 CAVIN1Q6NZI2 390 aaKnown RBP11.09□□□□□ -0.63
RFC4-210ENST00000449502 CCDC73Q6ZRK6 1079 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 ARMC9Q7Z3E5 817 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 CCDC84Q86UT8 332 aaPredicted RBP11.09□□□□□ -0.63
RFC4-210ENST00000449502 FBXO11Q86XK2 927 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 DAGLBQ8NCG7 672 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 ZNF280CQ8ND82 737 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 CUL5Q93034 780 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
RFC4-210ENST00000449502 KIFC2Q96AC6 838 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 KLRG1Q96E93 195 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 AMNQ9BXJ7 453 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 KIAA1683Q9H0B3 1180 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
RFC4-210ENST00000449502 ZHX2Q9Y6X8 837 aa11.09□□□□□ -0.63
RFC4-210ENST00000449502 ESYT2A0FGR8 921 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 C19orf81C9J6K1 198 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 PLA2G6O60733 806 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 PTPRAP18433 802 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 SPP2Q13103 211 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 MTMR2Q13614 643 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 QRICH1Q2TAL8 776 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 NOL9Q5SY16 702 aaKnown RBP11.08□□□□□ -0.64
RFC4-210ENST00000449502 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 LINC00301Q8NCQ3 95 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 COA7Q96BR5 231 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 CDCA5Q96FF9 252 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 GLIS2Q9BZE0 524 aaPredicted RBP11.08□□□□□ -0.64
RFC4-210ENST00000449502 FTOQ9C0B1 505 aaKnown RBP eCLIP11.08□□□□□ -0.64
RFC4-210ENST00000449502 TANGO6Q9C0B7 1094 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 ZMYND12Q9H0C1 365 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 PSTPIP2Q9H939 334 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 PNMA2Q9UL42 364 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 PRR12Q9ULL5 1215 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 PCDHA1Q9Y5I3 950 aa11.08□□□□□ -0.64
RFC4-210ENST00000449502 FOCADQ5VW36 1801 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 PPP6R2O75170 966 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 USP2O75604 605 aaPredicted RBP11.07□□□□□ -0.64
RFC4-210ENST00000449502 LETM1O95202 739 aaPredicted RBP11.07□□□□□ -0.64
RFC4-210ENST00000449502 VEGFAP15692 232 aaPredicted RBP11.07□□□□□ -0.64
RFC4-210ENST00000449502 SLC39A14Q15043 492 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 NONOQ15233 471 aaKnown RBP eCLIP11.07□□□□□ -0.64
RFC4-210ENST00000449502 TTC38Q5R3I4 469 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 MCTP2Q6DN12 878 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 CCDC174Q6PII3 467 aa11.07□□□□□ -0.64
RFC4-210ENST00000449502 CCAR1Q8IX12 1150 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms