RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 CLRN2A0PK11 232 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 GIPC1O14908 333 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 ARHGAP6O43182 974 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 LRMPQ12912 555 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 TAOK1Q7L7X3 1001 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 CROCCP2Q86T23 111 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
SCN10A-201ENST00000449082 COL4A3BPQ9Y5P4 624 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 STAT1P42224 750 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 POLGP54098 1239 aaPredicted RBP11.26□□□□□ -0.61
SCN10A-201ENST00000449082 RPS6KA1Q15418 735 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 RRAGAQ7L523 313 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 PEX26Q7Z412 305 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 UNC5CLQ8IV45 518 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 FAM178BQ8IXR5 827 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 AFAP1L2Q8N4X5 818 aa11.26□□□□□ -0.61
SCN10A-201ENST00000449082 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 SORBS3O60504 671 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 DNAJC21Q5F1R6 531 aaKnown RBP11.25□□□□□ -0.61
SCN10A-201ENST00000449082 CC2D2BQ6DHV5 1058 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 CCDC110Q8TBZ0 833 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
SCN10A-201ENST00000449082 RBSNQ9H1K0 784 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 SUGCTQ9HAC7 445 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 LARSQ9P2J5 1176 aaKnown RBP11.25□□□□□ -0.61
SCN10A-201ENST00000449082 FAM184BQ9ULE4 1060 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 ADORA1P30542 326 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
SCN10A-201ENST00000449082 CCDC93Q567U6 631 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 EBAG9O00559 213 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 TTLL1O95922 423 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 PFKFB1P16118 471 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 ERCC6LQ2NKX8 1250 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 LGSNQ5TDP6 509 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 ARMC9Q7Z3E5 817 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 CCDC94Q9BW85 323 aaPredicted RBP11.25□□□□□ -0.61
SCN10A-201ENST00000449082 ANO3Q9BYT9 981 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 BIRC2Q13490 618 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 DAAM2Q86T65 1068 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 GSDMBQ8TAX9 411 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 ST7Q9NRC1 585 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 FAM207AQ9NSI2 230 aaPredicted RBP11.25□□□□□ -0.61
SCN10A-201ENST00000449082 TSPOAP1O95153 1857 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 TFDP1Q14186 410 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 SRGAP1Q7Z6B7 1085 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 TRMT44Q8IYL2 757 aaKnown RBP11.25□□□□□ -0.61
SCN10A-201ENST00000449082 MIS12Q9H081 205 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 C1orf112Q9NSG2 853 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 ATG3Q9NT62 314 aa11.25□□□□□ -0.61
SCN10A-201ENST00000449082 PROSER3Q2NL68 480 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 FYB2Q5VWT5 728 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 ERO1AQ96HE7 468 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 PLEKHF1Q96S99 279 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 RTEL1Q9NZ71 1219 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 VPS52Q8N1B4 723 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 CCDC89Q8N998 374 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 CCDC51Q96ER9 411 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 NLRC4Q9NPP4 1024 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 GADD45BO75293 160 aaPredicted RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 GSPT1P15170 499 aaKnown RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 LONP1P36776 959 aaKnown RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 KIF11P52732 1056 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 PPP2R5DQ14738 602 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 ZMYM1Q5SVZ6 1142 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 MMS19Q96T76 1030 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 DBNDD1Q9H9R9 158 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 ARMCX3Q9UH62 379 aaPredicted RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 SAMD9LQ8IVG5 1584 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 CFAP221Q4G0U5 840 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 TYW1BQ6NUM6 668 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 INTS8Q75QN2 995 aaKnown RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 FEZ2Q9UHY8 353 aaPredicted RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 KCNJ18B7U540 433 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 TPD52P55327 224 aaPredicted RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 MTX1Q13505 466 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 MORC3Q14149 939 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 KCNJ12Q14500 433 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 GBP6Q6ZN66 633 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 SLC17A8Q8NDX2 589 aa11.24□□□□□ -0.61
SCN10A-201ENST00000449082 MRRFQ96E11 262 aaKnown RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 METTL14Q9HCE5 456 aaKnown RBP11.24□□□□□ -0.61
SCN10A-201ENST00000449082 GOLGA6CA6NDK9 693 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 GOLGA6BA6NDN3 693 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 GOLGA6DP0CG33 693 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 ARMCX5Q6P1M9 558 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 ROBO2Q9HCK4 1378 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 PFDN4Q9NQP4 134 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 GOLGA6AQ9NYA3 693 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 ADD3Q9UEY8 706 aaKnown RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 AMFRQ9UKV5 643 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 KIF1BO60333 1816 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 CAPN9O14815 690 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 GTPBP6O43824 516 aaPredicted RBP11.23□□□□□ -0.61
SCN10A-201ENST00000449082 TMEM191BP0C7N4 346 aa11.23□□□□□ -0.61
SCN10A-201ENST00000449082 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms