RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 STXBP5LQ9Y2K9 1186 aa17.22■□□□□ 0.35
USP39-206ENST00000448971 ORC4O43929 436 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 FLOT1O75955 427 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 VASPP50552 380 aaPredicted RBP17.21■□□□□ 0.35
USP39-206ENST00000448971 MAP2K5Q13163 448 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 BMP2KLQ5H9B9 411 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 KIAA1755Q5JYT7 1200 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 PPP4R3BQ5MIZ7 849 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 MFSD6Q6ZSS7 791 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 CCAR1Q8IX12 1150 aaKnown RBP17.21■□□□□ 0.35
USP39-206ENST00000448971 STAG1Q8WVM7 1258 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 APBA2Q99767 749 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 CWC22Q9HCG8 908 aaKnown RBP17.21■□□□□ 0.35
USP39-206ENST00000448971 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 MTMR4Q9NYA4 1195 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 ISY1Q9ULR0 285 aaKnown RBP17.21■□□□□ 0.35
USP39-206ENST00000448971 STX8Q9UNK0 236 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 SSUH2Q9Y2M2 353 aa17.21■□□□□ 0.35
USP39-206ENST00000448971 NEDD4P46934 1319 aa17.21■□□□□ 0.34
USP39-206ENST00000448971 SPDYE16A6NNV3 312 aaPredicted RBP17.2■□□□□ 0.34
USP39-206ENST00000448971 IGHA2P01877 340 aa17.2■□□□□ 0.34
USP39-206ENST00000448971 PCP11498 1178 aaKnown RBP17.2■□□□□ 0.34
USP39-206ENST00000448971 PPP4R2Q9NY27 417 aa17.2■□□□□ 0.34
USP39-206ENST00000448971 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
USP39-206ENST00000448971 A0A0G2JMZ2 1700 aa17.19■□□□□ 0.34
USP39-206ENST00000448971 SGSM2O43147 1006 aa17.19■□□□□ 0.34
USP39-206ENST00000448971 PTPREP23469 700 aa17.19■□□□□ 0.34
USP39-206ENST00000448971 FAM83BQ5T0W9 1011 aa17.19■□□□□ 0.34
USP39-206ENST00000448971 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
USP39-206ENST00000448971 LBX2Q6XYB7 198 aa17.19■□□□□ 0.34
USP39-206ENST00000448971 BTBD7Q9P203 1132 aa17.19■□□□□ 0.34
USP39-206ENST00000448971 MYH4Q9Y623 1939 aa17.19■□□□□ 0.34
USP39-206ENST00000448971 SLC15A5A6NIM6 579 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 NMT2O60551 498 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 NDUFB10O96000 172 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 HOXC6P09630 235 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 FGRP09769 529 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 MDM2Q00987 491 aaPredicted RBP17.18■□□□□ 0.34
USP39-206ENST00000448971 COG2Q14746 738 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 ESR2Q92731 530 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 NUP88Q99567 741 aaPredicted RBP17.18■□□□□ 0.34
USP39-206ENST00000448971 SYNPO2Q9UMS6 1093 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 VCANP13611 3396 aa17.18■□□□□ 0.34
USP39-206ENST00000448971 F5H6K3 240 aa17.17■□□□□ 0.34
USP39-206ENST00000448971 CCNA1P78396 465 aa17.17■□□□□ 0.34
USP39-206ENST00000448971 KLRC3Q07444 240 aa17.17■□□□□ 0.34
USP39-206ENST00000448971 WDR78Q5VTH9 848 aa17.17■□□□□ 0.34
USP39-206ENST00000448971 MFSD14CQ5VZR4 134 aa17.17■□□□□ 0.34
USP39-206ENST00000448971 CASC1Q6TDU7 716 aa17.17■□□□□ 0.34
USP39-206ENST00000448971 NPLOC4Q8TAT6 608 aa17.17■□□□□ 0.34
USP39-206ENST00000448971 ATG4CQ96DT6 458 aa17.17■□□□□ 0.34
USP39-206ENST00000448971 SENP6Q9GZR1 1112 aaPredicted RBP17.17■□□□□ 0.34
USP39-206ENST00000448971 FRMPD3Q5JV73 1810 aa17.17■□□□□ 0.34
USP39-206ENST00000448971 EYSQ5T1H1 3165 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 GRB14Q14449 540 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 SLFN13Q68D06 897 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 KIAA1211Q6ZU35 1233 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 GMCL1P1Q8NEA9 526 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 TRPV1Q8NER1 839 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 IL17RBQ9NRM6 502 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 FBXO28Q9NVF7 368 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 HOXC10Q9NYD6 342 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 DDX20Q9UHI6 824 aaKnown RBP17.16■□□□□ 0.34
USP39-206ENST00000448971 MTMR7Q9Y216 660 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 PRUNE2Q8WUY3 3088 aa17.16■□□□□ 0.34
USP39-206ENST00000448971 CDC45O75419 566 aa17.15■□□□□ 0.34
USP39-206ENST00000448971 PTH1RQ03431 593 aa17.15■□□□□ 0.34
USP39-206ENST00000448971 PLS1Q14651 629 aa17.15■□□□□ 0.34
USP39-206ENST00000448971 FAM109BQ6ICB4 259 aaPredicted RBP17.15■□□□□ 0.34
USP39-206ENST00000448971 MB21D1Q8N884 522 aa17.15■□□□□ 0.34
USP39-206ENST00000448971 MKL1Q969V6 931 aa17.15■□□□□ 0.34
USP39-206ENST00000448971 CHMP4CQ96CF2 233 aa17.15■□□□□ 0.34
USP39-206ENST00000448971 ESYT1Q9BSJ8 1104 aa17.15■□□□□ 0.34
USP39-206ENST00000448971 PARP14Q460N5 1801 aa17.14■□□□□ 0.34
USP39-206ENST00000448971 B4E1Z4 1266 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 MSCO60682 206 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 KDM4AO75164 1064 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 CYP2C19P33261 490 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 NT5C2P49902 561 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 IKQ13123 557 aaPredicted RBP17.14■□□□□ 0.33
USP39-206ENST00000448971 IQCA1Q86XH1 822 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 KRT23Q9C075 422 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 CNNM2Q9H8M5 875 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 ANO2Q9NQ90 1003 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 PPP1R9AQ9ULJ8 1098 aa17.14■□□□□ 0.33
USP39-206ENST00000448971 CTDP1Q9Y5B0 961 aaPredicted RBP17.14■□□□□ 0.33
USP39-206ENST00000448971 DNM1LO00429 736 aa17.13■□□□□ 0.33
USP39-206ENST00000448971 BMP3P12645 472 aa17.13■□□□□ 0.33
USP39-206ENST00000448971 SLC1A4P43007 532 aa17.13■□□□□ 0.33
USP39-206ENST00000448971 CCDC96Q2M329 555 aa17.13■□□□□ 0.33
USP39-206ENST00000448971 GUCD1Q96NT3 240 aa17.13■□□□□ 0.33
USP39-206ENST00000448971 ZKSCAN3Q9BRR0 538 aa17.13■□□□□ 0.33
USP39-206ENST00000448971 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
USP39-206ENST00000448971 TCP11L1Q9NUJ3 509 aa17.13■□□□□ 0.33
USP39-206ENST00000448971 IVNS1ABPQ9Y6Y0 642 aa17.13■□□□□ 0.33
USP39-206ENST00000448971 RLFQ13129 1914 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms