RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 DNAH12Q6ZR08 3092 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 FRMPD3Q5JV73 1810 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 TRIM43BA6NCK2 446 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 MOXD2PA6NHM9 499 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 ATP2A1O14983 1001 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 ZNF865P0CJ78 1059 aaPredicted RBP15.85■□□□□ 0.13
HMGB3-204ENST00000448905 TAL1P17542 331 aaPredicted RBP15.85■□□□□ 0.13
HMGB3-204ENST00000448905 SMAD3P84022 425 aaKnown RBP15.85■□□□□ 0.13
HMGB3-204ENST00000448905 PDE4BQ07343 736 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 PPP4R3BQ5MIZ7 849 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 ZNF467Q7Z7K2 595 aaPredicted RBP15.85■□□□□ 0.13
HMGB3-204ENST00000448905 OSBP2Q969R2 916 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 MKL1Q969V6 931 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 KIFC2Q96AC6 838 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 VTI1AQ96AJ9 217 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 TRIM43Q96BQ3 446 aaPredicted RBP15.85■□□□□ 0.13
HMGB3-204ENST00000448905 TOX2Q96NM4 488 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 NUP88Q99567 741 aaPredicted RBP15.85■□□□□ 0.13
HMGB3-204ENST00000448905 SYNGAP1Q96PV0 1343 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 A0A0C4DFX4 3053 aa15.85■□□□□ 0.13
HMGB3-204ENST00000448905 A0A1W2PQ45 241 aaPredicted RBP15.84■□□□□ 0.13
HMGB3-204ENST00000448905 A0A1W2PQY0 241 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 ERC2O15083 957 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 TTLL1O95922 423 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 NDUFB10O96000 172 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 ACLYP53396 1101 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 OAZ1P54368 228 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 MAMDC4Q6UXC1 1216 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 SH3RF1Q7Z6J0 888 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 PCSK9Q8NBP7 692 aaKnown RBP15.84■□□□□ 0.13
HMGB3-204ENST00000448905 CHST13Q8NET6 341 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 REPS2Q8NFH8 660 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 SEMA6BQ9H3T3 888 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 STARD7Q9NQZ5 370 aa15.84■□□□□ 0.13
HMGB3-204ENST00000448905 KIAA0355O15063 1070 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 GPAA1O43292 621 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 PQBP1O60828 265 aaKnown RBP15.83■□□□□ 0.12
HMGB3-204ENST00000448905 DUSP11O75319 330 aaKnown RBP15.83■□□□□ 0.12
HMGB3-204ENST00000448905 TSPY3P0CV98 308 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 TSPY8P0CW00 308 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 ACVR2BQ13705 512 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 C9orf50Q5SZB4 431 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 CCDC174Q6PII3 467 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.83■□□□□ 0.12
HMGB3-204ENST00000448905 CHURC1Q8WUH1 139 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 GLT1D1Q96MS3 346 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 GUCD1Q96NT3 240 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 ABHD16BQ9H3Z7 469 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 MTMR4Q9NYA4 1195 aa15.83■□□□□ 0.12
HMGB3-204ENST00000448905 ZHX1Q9UKY1 873 aaPredicted RBP15.83■□□□□ 0.12
HMGB3-204ENST00000448905 SNAI1O95863 264 aaPredicted RBP15.82■□□□□ 0.12
HMGB3-204ENST00000448905 FPGSQ05932 587 aa15.82■□□□□ 0.12
HMGB3-204ENST00000448905 KCNA10Q16322 511 aa15.82■□□□□ 0.12
HMGB3-204ENST00000448905 ANKRD33Q7Z3H0 272 aa15.82■□□□□ 0.12
HMGB3-204ENST00000448905 IFNL3Q8IZI9 196 aa15.82■□□□□ 0.12
HMGB3-204ENST00000448905 GMCL1P1Q8NEA9 526 aa15.82■□□□□ 0.12
HMGB3-204ENST00000448905 RNPC3Q96LT9 517 aaKnown RBP15.82■□□□□ 0.12
HMGB3-204ENST00000448905 CDX2Q99626 313 aaPredicted RBP15.82■□□□□ 0.12
HMGB3-204ENST00000448905 SLC38A10Q9HBR0 1119 aa15.82■□□□□ 0.12
HMGB3-204ENST00000448905 RAVER2Q9HCJ3 691 aaKnown RBP15.82■□□□□ 0.12
HMGB3-204ENST00000448905 ZBTB47Q9UFB7 747 aaPredicted RBP15.82■□□□□ 0.12
HMGB3-204ENST00000448905 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
HMGB3-204ENST00000448905 RIPK3Q9Y572 518 aa15.82■□□□□ 0.12
HMGB3-204ENST00000448905 DNAJC25-GNG10A0A024R161 153 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 ADAMTS4O75173 837 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 PRDM1O75626 825 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 ELP1O95163 1332 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 BMP3P12645 472 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 IKQ13123 557 aaPredicted RBP15.81■□□□□ 0.12
HMGB3-204ENST00000448905 GNASQ5JWF2 1037 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 C20orf194Q5TEA3 1177 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 MROH7Q68CQ1 1323 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 NEDD1Q8NHV4 660 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 CEP95Q96GE4 821 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 NAPBQ9H115 298 aa15.81■□□□□ 0.12
HMGB3-204ENST00000448905 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
HMGB3-204ENST00000448905 IGKV6D-41A0A0C4DH26 115 aa15.8■□□□□ 0.12
HMGB3-204ENST00000448905 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.8■□□□□ 0.12
HMGB3-204ENST00000448905 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.8■□□□□ 0.12
HMGB3-204ENST00000448905 TMEM232C9JQI7 657 aa15.8■□□□□ 0.12
HMGB3-204ENST00000448905 C6orf222P0C671 652 aaPredicted RBP15.8■□□□□ 0.12
HMGB3-204ENST00000448905 TFAP4Q01664 338 aa15.8■□□□□ 0.12
HMGB3-204ENST00000448905 FAAP100Q0VG06 881 aa15.8■□□□□ 0.12
HMGB3-204ENST00000448905 FAM160B2Q86V87 743 aa15.8■□□□□ 0.12
HMGB3-204ENST00000448905 KLHDC9Q8NEP7 349 aa15.8■□□□□ 0.12
HMGB3-204ENST00000448905 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.8■□□□□ 0.12
HMGB3-204ENST00000448905 SYNRGQ9UMZ2 1314 aa15.79■□□□□ 0.12
HMGB3-204ENST00000448905 TMEM265A0A087WTH1 108 aa15.79■□□□□ 0.12
HMGB3-204ENST00000448905 TIMP1P01033 207 aa15.79■□□□□ 0.12
HMGB3-204ENST00000448905 SLC1A4P43007 532 aa15.79■□□□□ 0.12
HMGB3-204ENST00000448905 STAT2P52630 851 aa15.79■□□□□ 0.12
HMGB3-204ENST00000448905 CCDC144BQ3MJ40 725 aa15.79■□□□□ 0.12
HMGB3-204ENST00000448905 NOL8Q76FK4 1167 aaKnown RBP15.79■□□□□ 0.12
HMGB3-204ENST00000448905 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.79■□□□□ 0.12
HMGB3-204ENST00000448905 ROBO3Q96MS0 1386 aa15.78■□□□□ 0.12
HMGB3-204ENST00000448905 ASB14A6NK59 587 aa15.78■□□□□ 0.12
HMGB3-204ENST00000448905 TLR3O15455 904 aaKnown RBP15.78■□□□□ 0.12
HMGB3-204ENST00000448905 ASGR1P07306 291 aa15.78■□□□□ 0.12
HMGB3-204ENST00000448905 CST5P28325 142 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms