RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ZNF662Q6ZS27 426 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 TTLL7Q6ZT98 887 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 CUL5Q93034 780 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 OSBP2Q969R2 916 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 SLC26A6Q9BXS9 759 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 ANGEL1Q9UNK9 670 aaKnown RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 SRPRBQ9Y5M8 271 aaKnown RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 MRC1P22897 1456 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 TACC1O75410 805 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 GUCY2FP51841 1108 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 DPYDQ12882 1025 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 ITGB3BPQ13352 177 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 RILPL1Q5EBL4 403 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 CDCA2Q69YH5 1023 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 WDR59Q6PJI9 974 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 DIS3L2Q8IYB7 885 aaKnown RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 PAGE5Q96GU1 130 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 SEC16BQ96JE7 1060 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 SMARCAL1Q9NZC9 954 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 TRPC6Q9Y210 931 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 PCDHB6Q9Y5E3 794 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 IFIT1P09914 478 aaKnown RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 CXCR5P32302 372 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 CYP27A1Q02318 531 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 GCKRQ14397 625 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 NBPF10Q6P3W6 841 aaKnown RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 STAMQ92783 540 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 CCDC47Q96A33 483 aaKnown RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 HVCN1Q96D96 273 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 LEMD3Q9Y2U8 911 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 SH3BP1Q9Y3L3 701 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 PRAMEF22A3QJZ6 481 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 UBE2Q2LH0YL09 131 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 FAM153BP0C7A2 387 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 RFX5P48382 616 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 CARSP49589 748 aaKnown RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 TIMM10P62072 90 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 ELF3P78545 371 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 PAK2Q13177 524 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 FAM153CQ494X1 144 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 NFXL1Q6ZNB6 911 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 BZW1Q7L1Q6 419 aaKnown RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 TRIM58Q8NG06 486 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 DNAJC7Q99615 494 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 BSDC1Q9NW68 430 aaPredicted RBP10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 FAM153AQ9UHL3 310 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 CEP131Q9UPN4 1083 aa10.48□□□□□ -0.73
SYNPO2-204ENST00000448416 NEURL1BA8MQ27 555 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 HOXC9P31274 260 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 QPCTQ16769 361 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 CCDC96Q2M329 555 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 SMCR8Q8TEV9 937 aaPredicted RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 EHD2Q9NZN4 543 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 SSRP1Q08945 709 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 CD302Q8IX05 232 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 C3orf20Q8ND61 904 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 EPSTI1Q96J88 318 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 OSBPL9Q96SU4 736 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 MYD88Q99836 296 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 EPB41L5Q9HCM4 733 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 SLC39A2Q9NP94 309 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 KCNJ14Q9UNX9 436 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 MED1Q15648 1581 aaPredicted RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 GOLGA8AA7E2F4 631 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 BACH1O14867 736 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 ZBTB43O43298 467 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 TCP1P17987 556 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 TNFRSF8P28908 595 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 PAK1Q13153 545 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 LACTB2Q53H82 288 aaPredicted RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 NFRKBQ6P4R8 1299 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 APOA5Q6Q788 366 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 MPRIPQ6WCQ1 1025 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 TAX1BP1Q86VP1 789 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 NHEJ1Q9H9Q4 299 aaPredicted RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 HOMER3Q9NSC5 361 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 IRAK4Q9NWZ3 460 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 CAPN11Q9UMQ6 739 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 UBN2Q6ZU65 1347 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 ESYT3A0FGR9 886 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 SH2B2O14492 632 aaPredicted RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 USO1O60763 962 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 DNAJC8O75937 253 aaPredicted RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 ANP32DO95626 131 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 GUCY2DQ02846 1103 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 TRAF1Q13077 416 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 SPA17Q15506 151 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 ODF2Q5BJF6 829 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 CPLX4Q7Z7G2 160 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 MB21D1Q8N884 522 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 TCP11Q8WWU5 503 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 RBM33Q96EV2 1170 aaKnown RBP10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 NUP58Q9BVL2 599 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 EBF2Q9HAK2 575 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 C15orf41Q9Y2V0 281 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 HYOU1Q9Y4L1 999 aa10.47□□□□□ -0.73
SYNPO2-204ENST00000448416 CPDO75976 1380 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms