RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 LIG3P49916 1009 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 GRAMD1BQ3KR37 738 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 CATSPER1Q8NEC5 780 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 DTX3LQ8TDB6 740 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 SUN2Q9UH99 717 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 TEX28O15482 410 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 SLC9A5Q14940 896 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 HSP90AA4PQ58FG1 418 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 MYRIPQ8NFW9 859 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 NR1I2O75469 434 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 SCG2P13521 617 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 KAZNQ674X7 775 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 C4orf50Q6ZRC1 276 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 TTLL7Q6ZT98 887 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 STAMBPL1Q96FJ0 436 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 ZBTB18Q99592 522 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 BRIP1Q9BX63 1249 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 INTS9Q9NV88 658 aaKnown RBP9.75□□□□□ -0.85
NIPBL-202ENST00000448238 NOP53Q9NZM5 478 aaKnown RBP9.75□□□□□ -0.85
NIPBL-202ENST00000448238 RWDD2BP57060 319 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 BSPRYQ5W0U4 402 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 DNAJC25Q9H1X3 360 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 ZRANB1Q9UGI0 708 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 IGSF3O75054 1194 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 PLCG2P16885 1265 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 CTTNQ14247 550 aaKnown RBP9.75□□□□□ -0.85
NIPBL-202ENST00000448238 ALS2CLQ60I27 953 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 THOC7Q6I9Y2 204 aaKnown RBP9.75□□□□□ -0.85
NIPBL-202ENST00000448238 TEX11Q8IYF3 940 aa9.75□□□□□ -0.85
NIPBL-202ENST00000448238 SCG3Q8WXD2 468 aaKnown RBP9.75□□□□□ -0.85
NIPBL-202ENST00000448238 XPAP23025 273 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-202ENST00000448238 RFWD2Q8NHY2 731 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 TCP11Q8WWU5 503 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 DHX58Q96C10 678 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 PSMC1P62191 440 aaKnown RBP9.74□□□□□ -0.85
NIPBL-202ENST00000448238 WASHC5Q12768 1159 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 BFSP2Q13515 415 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 LETM2Q2VYF4 491 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-202ENST00000448238 DACT1Q9NYF0 836 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 STRIP2Q9ULQ0 834 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 CARMIL1Q5VZK9 1371 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 CHGBP05060 677 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 ADCY8P40145 1251 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 ZC3H18Q86VM9 953 aaKnown RBP9.74□□□□□ -0.85
NIPBL-202ENST00000448238 PIK3R5Q8WYR1 880 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 CFAP36Q96G28 342 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 COQ7Q99807 217 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 KLC2Q9H0B6 622 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 TRIM33Q9UPN9 1127 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 GOLGA8IPA6NC78 632 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 APOBRQ0VD83 1088 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 FAM96AQ9H5X1 160 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 PASKQ96RG2 1323 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 A0A0B4J269 797 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 SERPINB1P30740 379 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 RUNX1T1Q06455 604 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 TUBB3Q13509 450 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 CDR2LQ86X02 465 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-202ENST00000448238 OSBPL10Q9BXB5 764 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 GDPD2Q9HCC8 539 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 PTPRCP08575 1304 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 KRT6AP02538 564 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 KRT6BP04259 564 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 KRT6CP48668 564 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 LRRC49Q8IUZ0 686 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 JPH2Q9BR39 696 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-202ENST00000448238 CCDC90BQ9GZT6 254 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 A0A087WUV0 522 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-202ENST00000448238 GNAT2P19087 354 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 GUCY2CP25092 1073 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 PDE1BQ01064 536 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 CAPRIN1Q14444 709 aaKnown RBP9.74□□□□□ -0.85
NIPBL-202ENST00000448238 RAB3GAP1Q15042 981 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 KRT77Q7Z794 578 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 EXOC6BQ9Y2D4 811 aa9.74□□□□□ -0.85
NIPBL-202ENST00000448238 FYCO1Q9BQS8 1478 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 DCTN3O75935 186 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 IFNB1P01574 187 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 OCRLQ01968 901 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 RINLQ6ZS11 566 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 TAGAPQ8N103 731 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 PLS1Q14651 629 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 ANO5Q75V66 913 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 RTL3Q8N8U3 475 aaKnown RBP9.73□□□□□ -0.85
NIPBL-202ENST00000448238 L3MBTL3Q96JM7 780 aaPredicted RBP9.73□□□□□ -0.85
NIPBL-202ENST00000448238 LARP6Q9BRS8 491 aaKnown RBP9.73□□□□□ -0.85
NIPBL-202ENST00000448238 INTS13Q9NVM9 706 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 RAB20Q9NX57 234 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 POTEFA5A3E0 1075 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 PUM3Q15397 648 aaKnown RBP9.73□□□□□ -0.85
NIPBL-202ENST00000448238 STOML1Q9UBI4 398 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 M0QZ92 97 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 MAPK13O15264 365 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 RASSF7Q02833 373 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 ACRBPQ8NEB7 543 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 UBAP1Q9NZ09 502 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 LMCD1Q9NZU5 365 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 FAM83GA6ND36 823 aa9.73□□□□□ -0.85
NIPBL-202ENST00000448238 UQCRFS1P1P0C7P4 283 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms