RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 SOX10P56693 466 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 HERVK_113P62684 666 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 USP17L24Q0WX57 530 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 SLC9C1Q4G0N8 1177 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 CTCFLQ8NI51 663 aaPredicted RBP13.52□□□□□ -0.25
LINC00408-201ENST00000447784 P2RX7Q99572 595 aaKnown RBP13.52□□□□□ -0.25
LINC00408-201ENST00000447784 RPAP3Q9H6T3 665 aaPredicted RBP13.52□□□□□ -0.25
LINC00408-201ENST00000447784 MYH1P12882 1939 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 LOC285556D6RIA3 1793 aa13.51□□□□□ -0.25
LINC00408-201ENST00000447784 MYPNQ86TC9 1320 aa13.51□□□□□ -0.25
LINC00408-201ENST00000447784 TNPO2O14787 897 aaKnown RBP13.51□□□□□ -0.25
LINC00408-201ENST00000447784 ZBTB43O43298 467 aa13.51□□□□□ -0.25
LINC00408-201ENST00000447784 PARP1P09874 1014 aaKnown RBP13.51□□□□□ -0.25
LINC00408-201ENST00000447784 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
LINC00408-201ENST00000447784 COL9A3Q14050 684 aaPredicted RBP13.51□□□□□ -0.25
LINC00408-201ENST00000447784 FAM83BQ5T0W9 1011 aa13.51□□□□□ -0.25
LINC00408-201ENST00000447784 GPATCH4Q5T3I0 446 aaKnown RBP13.51□□□□□ -0.25
LINC00408-201ENST00000447784 CATSPERGQ6ZRH7 1159 aa13.51□□□□□ -0.25
LINC00408-201ENST00000447784 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
LINC00408-201ENST00000447784 ZNF654Q8IZM8 581 aa13.51□□□□□ -0.25
LINC00408-201ENST00000447784 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
LINC00408-201ENST00000447784 ZNF333Q96JL9 665 aa13.51□□□□□ -0.25
LINC00408-201ENST00000447784 NUP88Q99567 741 aaPredicted RBP13.51□□□□□ -0.25
LINC00408-201ENST00000447784 CTDP1Q9Y5B0 961 aaPredicted RBP13.51□□□□□ -0.25
LINC00408-201ENST00000447784 FRMPD2Q68DX3 1309 aaPredicted RBP13.5□□□□□ -0.25
LINC00408-201ENST00000447784 GOLGA8BA8MQT2 603 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 FLOT1O75955 427 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 PDHBP11177 359 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 GNAQP50148 359 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 PRKCZQ05513 592 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 APOBRQ0VD83 1088 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 IRF5Q13568 498 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 ASPRV1Q53RT3 343 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 LBX2Q6XYB7 198 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 FAM160B2Q86V87 743 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 RAET1EQ8TD07 263 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 CHURC1Q8WUH1 139 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 COA7Q96BR5 231 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 KIF2CQ99661 725 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 ALDH8A1Q9H2A2 487 aaPredicted RBP13.5□□□□□ -0.25
LINC00408-201ENST00000447784 SENP2Q9HC62 589 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 HOXC10Q9NYD6 342 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 RBPJLQ9UBG7 517 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 FEM1BQ9UK73 627 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 PTPRFP10586 1907 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 ATAD5Q96QE3 1844 aa13.5□□□□□ -0.25
LINC00408-201ENST00000447784 HTTP42858 3142 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 TMEM232C9JQI7 657 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 DHX16O60231 1041 aaKnown RBP13.49□□□□□ -0.25
LINC00408-201ENST00000447784 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
LINC00408-201ENST00000447784 SLC34A2O95436 690 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 GRK4P32298 578 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 FLT3LGP49771 235 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 STAT2P52630 851 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 AK2P54819 239 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 ZNF543Q08ER8 600 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 COG2Q14746 738 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 KIAA1755Q5JYT7 1200 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 APOA5Q6Q788 366 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 KCTD1Q719H9 257 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 NOL8Q76FK4 1167 aaKnown RBP13.49□□□□□ -0.25
LINC00408-201ENST00000447784 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 GPRC5AQ8NFJ5 357 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 MAP3K14Q99558 947 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 BRPF3Q9ULD4 1205 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 RABGAP1Q9Y3P9 1069 aa13.49□□□□□ -0.25
LINC00408-201ENST00000447784 BAZ2AQ9UIF9 1905 aaKnown RBP13.49□□□□□ -0.25
LINC00408-201ENST00000447784 GOLGA8AA7E2F4 631 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 SNHG28P0DPA3 235 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 MCM2P49736 904 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00408-201ENST00000447784 RCAN1P53805 252 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 ERVK-9P63128 1117 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 ERVK-24P63145 666 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 TROAPQ12815 778 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 TOB2Q14106 344 aaPredicted RBP13.48□□□□□ -0.25
LINC00408-201ENST00000447784 GRM4Q14833 912 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 PPP2R5BQ15173 497 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 RAB11FIP4Q86YS3 637 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
LINC00408-201ENST00000447784 FANCBQ8NB91 859 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 SH3TC2Q8TF17 1288 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 KIFC2Q96AC6 838 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 ZNF274Q96GC6 653 aaPredicted RBP13.48□□□□□ -0.25
LINC00408-201ENST00000447784 SLF1Q9BQI6 1058 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 LZTS2Q9BRK4 669 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 LARP6Q9BRS8 491 aaKnown RBP13.48□□□□□ -0.25
LINC00408-201ENST00000447784 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 AGXT2Q9BYV1 514 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 TXNRD2Q9NNW7 524 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 RBM28Q9NW13 759 aaKnown RBP13.48□□□□□ -0.25
LINC00408-201ENST00000447784 GABRQQ9UN88 632 aa13.48□□□□□ -0.25
LINC00408-201ENST00000447784 LIMCH1Q9UPQ0 1083 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms