RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 TMC3Q7Z5M5 1100 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 FRMD5Q7Z6J6 570 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 LDHDQ86WU2 507 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 IGDCC3Q8IVU1 814 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 TMEFF1Q8IYR6 380 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 USHBP1Q8N6Y0 703 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 LINC01356Q8N9X3 169 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 LINC00116Q8NCU8 138 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 TCTN2Q96GX1 697 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 PWWP2AQ96N64 755 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 SORCS2Q96PQ0 1159 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 KIF2CQ99661 725 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 PLCD4Q9BRC7 762 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 BDH2Q9BUT1 245 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 SLITRK6Q9H5Y7 841 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 KLHL14Q9P2G3 628 aa2.14□□□□□ -2.07
SNHG3-203ENST00000447507 GPR55Q9Y2T6 319 aaPredicted RBP2.14□□□□□ -2.07
SNHG3-203ENST00000447507 WTIPA6NIX2 430 aaPredicted RBP2.13□□□□□ -2.07
SNHG3-203ENST00000447507 NUDT19A8MXV4 375 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 RGS13O14921 159 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 SIGLEC6O43699 453 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 DNAJA2O60884 412 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 PRAMEF1O95521 474 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 PF4P02776 101 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 RAG1P15918 1043 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 TGM1P22735 817 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 CAP1Q01518 475 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 PLP2Q04941 152 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 KCNA1Q09470 495 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 LAPTM5Q13571 262 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 MPP2Q14168 576 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 RAB3GAP1Q15042 981 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 TAF1CQ15572 869 aaPredicted RBP2.13□□□□□ -2.07
SNHG3-203ENST00000447507 HSF5Q4G112 596 aaPredicted RBP2.13□□□□□ -2.07
SNHG3-203ENST00000447507 EAPPQ56P03 285 aaPredicted RBP2.13□□□□□ -2.07
SNHG3-203ENST00000447507 SNAP47Q5SQN1 464 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 REC114Q7Z4M0 266 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 VWCEQ96DN2 955 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 RHOVQ96L33 236 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.13□□□□□ -2.07
SNHG3-203ENST00000447507 TNFRSF12AQ9NP84 129 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 RNF19AQ9NV58 838 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 TNFRSF10DQ9UBN6 386 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 POLR3KQ9Y2Y1 108 aaPredicted RBP2.13□□□□□ -2.07
SNHG3-203ENST00000447507 PCDHA5Q9Y5H7 936 aa2.13□□□□□ -2.07
SNHG3-203ENST00000447507 FADS2P1A8MWK0 482 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 F6X3S4 739 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 BUB1BO60566 1050 aaPredicted RBP2.12□□□□□ -2.07
SNHG3-203ENST00000447507 UBOX5O94941 541 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 PRKCAP17252 672 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 PFKLP17858 780 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 KCNC1P48547 511 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 RAD51AP2Q09MP3 1159 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 PSMD2Q13200 908 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 SNW1Q13573 536 aaKnown RBP2.12□□□□□ -2.07
SNHG3-203ENST00000447507 PWP1Q13610 501 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 RTP5Q14D33 572 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 NBPF9Q3BBW0 867 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 PLEKHN1Q494U1 663 aaPredicted RBP2.12□□□□□ -2.07
SNHG3-203ENST00000447507 ARSHQ5FYA8 562 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 NBPF12Q5TAG4 269 aaPredicted RBP2.12□□□□□ -2.07
SNHG3-203ENST00000447507 ZPBP2Q6X784 338 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 RPTNQ6XPR3 784 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 SLCO6A1Q86UG4 719 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 NLGN1Q8N2Q7 840 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 TP53I13Q8NBR0 393 aaPredicted RBP2.12□□□□□ -2.07
SNHG3-203ENST00000447507 NUP43Q8NFH3 380 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 EAF1Q96JC9 268 aaPredicted RBP2.12□□□□□ -2.07
SNHG3-203ENST00000447507 TMEM74Q96NL1 305 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 CDADC1Q9BWV3 514 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 ERVK13-1Q9NX77 482 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 GMIPQ9P107 970 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 CNOT11Q9UKZ1 510 aaKnown RBP2.12□□□□□ -2.07
SNHG3-203ENST00000447507 PALD1Q9ULE6 856 aa2.12□□□□□ -2.07
SNHG3-203ENST00000447507 A0A1W2PQ45 241 aaPredicted RBP2.11□□□□□ -2.07
SNHG3-203ENST00000447507 A0A1W2PQY0 241 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 K7ESM1 405 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 FFAR3O14843 346 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 CLEC3AO75596 197 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 ZNF205O95201 554 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 ONECUT2O95948 504 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 CTSHP09668 335 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 IGFBP6P24592 240 aaPredicted RBP2.11□□□□□ -2.07
SNHG3-203ENST00000447507 POLR2BP30876 1174 aaKnown RBP2.11□□□□□ -2.07
SNHG3-203ENST00000447507 GBP2P32456 591 aaPredicted RBP2.11□□□□□ -2.07
SNHG3-203ENST00000447507 BMP8BP34820 402 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 LIMS1P48059 325 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 MAPKAPK2P49137 400 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 HMGA2P52926 109 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 SLURP1P55000 103 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 NCKAP1LP55160 1127 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 DAB2P98082 770 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 ZNF200P98182 395 aaPredicted RBP2.11□□□□□ -2.07
SNHG3-203ENST00000447507 CYP4F8P98187 520 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 FAM160A1Q05DH4 1040 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 PUM1Q14671 1186 aaKnown RBP eCLIP2.11□□□□□ -2.07
SNHG3-203ENST00000447507 CBX2Q14781 532 aaPredicted RBP2.11□□□□□ -2.07
SNHG3-203ENST00000447507 KIR3DS1Q14943 382 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 NR1I3Q14994 352 aa2.11□□□□□ -2.07
SNHG3-203ENST00000447507 ZNF827Q17R98 1081 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms