RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 KCNB1Q14721 858 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 CASP8Q14790 479 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 TRAPPC11Q7Z392 1133 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 MB21D1Q8N884 522 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 ZNF507Q8TCN5 953 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 GDAQ9Y2T3 454 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 DOT1LQ8TEK3 1739 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 TTC26A0AVF1 554 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 MYL1P05976 194 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 STAT6P42226 847 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 LMAN1P49257 510 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 CAVIN4Q5BKX8 364 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 SH3GLB2Q9NR46 395 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 DISC1Q9NRI5 854 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 TMEM51Q9NW97 253 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 CWC15Q9P013 229 aaKnown RBP21.47■■□□□ 1.03
SDCBP-204ENST00000447182 BAZ2BQ9UIF8 2168 aaKnown RBP21.47■■□□□ 1.03
SDCBP-204ENST00000447182 CAPN2P17655 700 aa21.46■■□□□ 1.03
SDCBP-204ENST00000447182 NOA1Q8NC60 698 aaKnown RBP21.46■■□□□ 1.03
SDCBP-204ENST00000447182 THAP9Q9H5L6 903 aa21.46■■□□□ 1.03
SDCBP-204ENST00000447182 CAPN11Q9UMQ6 739 aa21.46■■□□□ 1.03
SDCBP-204ENST00000447182 LUC7L2Q9Y383 392 aaKnown RBP21.46■■□□□ 1.03
SDCBP-204ENST00000447182 ACTN2P35609 894 aa21.46■■□□□ 1.03
SDCBP-204ENST00000447182 BLIDQ8IZY5 108 aa21.46■■□□□ 1.03
SDCBP-204ENST00000447182 CCDC148Q8NFR7 591 aa21.46■■□□□ 1.03
SDCBP-204ENST00000447182 SUGCTQ9HAC7 445 aa21.46■■□□□ 1.03
SDCBP-204ENST00000447182 BSDC1Q9NW68 430 aaPredicted RBP21.46■■□□□ 1.03
SDCBP-204ENST00000447182 VPS18Q9P253 973 aa21.46■■□□□ 1.03
SDCBP-204ENST00000447182 PDS5AQ29RF7 1337 aaKnown RBP21.45■■□□□ 1.03
SDCBP-204ENST00000447182 ADAMTS3O15072 1205 aa21.45■■□□□ 1.02
SDCBP-204ENST00000447182 ZBTB22O15209 634 aa21.45■■□□□ 1.02
SDCBP-204ENST00000447182 NMT2O60551 498 aa21.45■■□□□ 1.02
SDCBP-204ENST00000447182 KIF5BP33176 963 aa21.45■■□□□ 1.02
SDCBP-204ENST00000447182 NAALADL2Q58DX5 795 aa21.45■■□□□ 1.02
SDCBP-204ENST00000447182 ANKRD18AQ8IVF6 992 aa21.45■■□□□ 1.02
SDCBP-204ENST00000447182 FAM71BQ8TC56 605 aa21.45■■□□□ 1.02
SDCBP-204ENST00000447182 DCP1AQ9NPI6 582 aaPredicted RBP21.45■■□□□ 1.02
SDCBP-204ENST00000447182 COL14A1Q05707 1796 aaKnown RBP21.45■■□□□ 1.02
SDCBP-204ENST00000447182 VEGFAP15692 232 aaPredicted RBP21.44■■□□□ 1.02
SDCBP-204ENST00000447182 NSUN4Q96CB9 384 aaKnown RBP21.44■■□□□ 1.02
SDCBP-204ENST00000447182 FAM84BQ96KN1 310 aaPredicted RBP21.44■■□□□ 1.02
SDCBP-204ENST00000447182 ATP8A2Q9NTI2 1148 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 GUCA1BQ9UMX6 200 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 MEA1Q16626 185 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 SBK1Q52WX2 424 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 NCAPH2Q6IBW4 605 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 ACBD3Q9H3P7 528 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 VIPAS39Q9H9C1 493 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 MED4Q9NPJ6 270 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 PCDHA4Q9UN74 947 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 MAPK8IP1Q9UQF2 711 aa21.44■■□□□ 1.02
SDCBP-204ENST00000447182 PAPD7Q5XG87 772 aaKnown RBP21.43■■□□□ 1.02
SDCBP-204ENST00000447182 WDR59Q6PJI9 974 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 NOC3LQ8WTT2 800 aaKnown RBP21.43■■□□□ 1.02
SDCBP-204ENST00000447182 CRNKL1Q9BZJ0 848 aaKnown RBP21.43■■□□□ 1.02
SDCBP-204ENST00000447182 WNK3Q9BYP7 1800 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 TRIM49BA6NDI0 452 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 M0R2N6 131 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 KLRC4O43908 158 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 N4BP1O75113 896 aaKnown RBP21.43■■□□□ 1.02
SDCBP-204ENST00000447182 RPS6KA5O75582 802 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 RHOBTB3O94955 611 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 MCM3P25205 808 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 ATP6V1AP38606 617 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 USP14P54578 494 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 KRT83P78385 493 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 STIM1Q13586 685 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 SF3B3Q15393 1217 aaKnown RBP21.43■■□□□ 1.02
SDCBP-204ENST00000447182 TSR1Q2NL82 804 aaKnown RBP21.43■■□□□ 1.02
SDCBP-204ENST00000447182 FAM47AQ5JRC9 791 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 RCSD1Q6JBY9 416 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 EHBP1Q8NDI1 1231 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 RPGRIP1Q96KN7 1286 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 ARPP21Q9UBL0 812 aaPredicted RBP21.43■■□□□ 1.02
SDCBP-204ENST00000447182 TRIM10Q9UDY6 481 aa21.43■■□□□ 1.02
SDCBP-204ENST00000447182 KIAA1551Q9HCM1 1747 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 MYH14Q7Z406 1995 aaKnown RBP21.42■■□□□ 1.02
SDCBP-204ENST00000447182 WTIPA6NIX2 430 aaPredicted RBP21.42■■□□□ 1.02
SDCBP-204ENST00000447182 NT5C2P49902 561 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 DNM2P50570 870 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 PMS1P54277 932 aaKnown RBP21.42■■□□□ 1.02
SDCBP-204ENST00000447182 HERVK_113P62684 666 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 DTHD1Q6ZMT9 781 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 FAM205AQ6ZU69 1335 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 FBXO33Q7Z6M2 555 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 GIMAP8Q8ND71 665 aaPredicted RBP21.42■■□□□ 1.02
SDCBP-204ENST00000447182 CCSER1Q9C0I3 900 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 KBTBD4Q9NVX7 518 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 FAN1Q9Y2M0 1017 aa21.42■■□□□ 1.02
SDCBP-204ENST00000447182 PSMA7O14818 248 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 EVX2Q03828 476 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 HSP90B2PQ58FF3 399 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 TTYH3Q9C0H2 523 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 MINPP1Q9UNW1 487 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 SAR1BQ9Y6B6 198 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 ADAMTS2O95450 1211 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 SRGNP10124 158 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 MECOMQ03112 1051 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 TTI2Q6NXR4 508 aa21.41■■□□□ 1.02
SDCBP-204ENST00000447182 RETREG2Q8NC44 543 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms