RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 SLC38A10Q9HBR0 1119 aa25.72■■□□□ 1.71
APOE-204ENST00000446996 SRRDQ9UH36 339 aa25.72■■□□□ 1.71
APOE-204ENST00000446996 PTPN22Q9Y2R2 807 aa25.72■■□□□ 1.71
APOE-204ENST00000446996 SH2B2O14492 632 aaPredicted RBP25.71■■□□□ 1.71
APOE-204ENST00000446996 TMEM132BQ14DG7 1078 aa25.71■■□□□ 1.71
APOE-204ENST00000446996 KIFC2Q96AC6 838 aa25.71■■□□□ 1.71
APOE-204ENST00000446996 MAP3K14Q99558 947 aa25.71■■□□□ 1.71
APOE-204ENST00000446996 LY9Q9HBG7 655 aa25.71■■□□□ 1.71
APOE-204ENST00000446996 ZSWIM8A7E2V4 1837 aa25.71■■□□□ 1.71
APOE-204ENST00000446996 RIOX2Q8IUF8 465 aa25.7■■□□□ 1.7
APOE-204ENST00000446996 CCAR1Q8IX12 1150 aaKnown RBP25.7■■□□□ 1.7
APOE-204ENST00000446996 MOV10L1Q9BXT6 1211 aaKnown RBP25.7■■□□□ 1.7
APOE-204ENST00000446996 TM6SF1Q9BZW5 370 aa25.7■■□□□ 1.7
APOE-204ENST00000446996 ZNF214Q9UL59 606 aaPredicted RBP25.7■■□□□ 1.7
APOE-204ENST00000446996 ISY1Q9ULR0 285 aaKnown RBP25.7■■□□□ 1.7
APOE-204ENST00000446996 MTMR7Q9Y216 660 aa25.7■■□□□ 1.7
APOE-204ENST00000446996 CTDP1Q9Y5B0 961 aaPredicted RBP25.7■■□□□ 1.7
APOE-204ENST00000446996 PEX10O60683 326 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 PARP1P09874 1014 aaKnown RBP25.69■■□□□ 1.7
APOE-204ENST00000446996 STAT3P40763 770 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 ANAPC15P60006 121 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 IKQ13123 557 aaPredicted RBP25.69■■□□□ 1.7
APOE-204ENST00000446996 C8orf34Q49A92 452 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 CATIPQ7Z7H3 387 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 SGMS1Q86VZ5 419 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 FBXL16Q8N461 479 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 MCOLN1Q9GZU1 580 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 PORCNQ9H237 461 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 MROH8Q9H579 483 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 PRR12Q9ULL5 1215 aa25.69■■□□□ 1.7
APOE-204ENST00000446996 STRNO43815 780 aa25.68■■□□□ 1.7
APOE-204ENST00000446996 TROAPQ12815 778 aa25.68■■□□□ 1.7
APOE-204ENST00000446996 BLOC1S2Q6QNY1 142 aa25.68■■□□□ 1.7
APOE-204ENST00000446996 SAMD1Q6SPF0 538 aaPredicted RBP25.68■■□□□ 1.7
APOE-204ENST00000446996 RASGRP2Q7LDG7 609 aa25.68■■□□□ 1.7
APOE-204ENST00000446996 PLEKHH3Q7Z736 793 aa25.68■■□□□ 1.7
APOE-204ENST00000446996 JAKMIP1Q96N16 626 aaKnown RBP25.68■■□□□ 1.7
APOE-204ENST00000446996 TEX13BQ9BXU2 312 aa25.68■■□□□ 1.7
APOE-204ENST00000446996 GPCPD1Q9NPB8 672 aa25.68■■□□□ 1.7
APOE-204ENST00000446996 PNMA2Q9UL42 364 aa25.68■■□□□ 1.7
APOE-204ENST00000446996 DDAH1O94760 285 aa25.67■■□□□ 1.7
APOE-204ENST00000446996 IRF5Q13568 498 aa25.67■■□□□ 1.7
APOE-204ENST00000446996 COL9A3Q14050 684 aaPredicted RBP25.67■■□□□ 1.7
APOE-204ENST00000446996 SYDE2Q5VT97 1194 aa25.67■■□□□ 1.7
APOE-204ENST00000446996 TTBK2Q6IQ55 1244 aa25.67■■□□□ 1.7
APOE-204ENST00000446996 GPR142Q7Z601 462 aa25.67■■□□□ 1.7
APOE-204ENST00000446996 IL17RAQ96F46 866 aa25.67■■□□□ 1.7
APOE-204ENST00000446996 SENP2Q9HC62 589 aa25.67■■□□□ 1.7
APOE-204ENST00000446996 GJD2Q9UKL4 321 aa25.67■■□□□ 1.7
APOE-204ENST00000446996 FRMPD2Q68DX3 1309 aaPredicted RBP25.66■■□□□ 1.7
APOE-204ENST00000446996 PALM3A6NDB9 673 aaPredicted RBP25.66■■□□□ 1.7
APOE-204ENST00000446996 CCDC69A6NI79 296 aa25.66■■□□□ 1.7
APOE-204ENST00000446996 PLS1Q14651 629 aa25.66■■□□□ 1.7
APOE-204ENST00000446996 GRM4Q14833 912 aa25.66■■□□□ 1.7
APOE-204ENST00000446996 SOCS4Q8WXH5 440 aa25.66■■□□□ 1.7
APOE-204ENST00000446996 RANBP17Q9H2T7 1088 aaKnown RBP25.66■■□□□ 1.7
APOE-204ENST00000446996 CALM1P0DP23 149 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 CALM2P0DP24 149 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 CALM3P0DP25 149 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 ERCC3P19447 782 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.65■■□□□ 1.76e-9■■□□□ 12.5
APOE-204ENST00000446996 ZNF654Q8IZM8 581 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 ABRAQ8N0Z2 381 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 CHMP4CQ96CF2 233 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 NUDT12Q9BQG2 462 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 ZSWIM6Q9HCJ5 1215 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 IVNS1ABPQ9Y6Y0 642 aa25.65■■□□□ 1.7
APOE-204ENST00000446996 SLC15A5A6NIM6 579 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 RPS6KB1P23443 525 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 PTPREP23469 700 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 PRKCZQ05513 592 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 TKFCQ3LXA3 575 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 MORN1Q5T089 497 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 NFXL1Q6ZNB6 911 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 ABHD8Q96I13 439 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 CWC22Q9HCG8 908 aaKnown RBP25.64■■□□□ 1.7
APOE-204ENST00000446996 GPHNQ9NQX3 736 aaPredicted RBP25.64■■□□□ 1.7
APOE-204ENST00000446996 MAD2L2Q9UI95 211 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 PLXNB2O15031 1838 aa25.64■■□□□ 1.7
APOE-204ENST00000446996 ZNFX1Q9P2E3 1918 aaKnown RBP25.63■■□□□ 1.69
APOE-204ENST00000446996 SEC24BO95487 1268 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 GOLGA8HP0CJ92 632 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 SLC16A2P36021 539 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 FLT3LGP49771 235 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 SNRNP48Q6IEG0 339 aaKnown RBP25.63■■□□□ 1.69
APOE-204ENST00000446996 NCAPG2Q86XI2 1143 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 PXYLP1Q8TE99 480 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 USP6NLQ92738 828 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 LRRC2Q9BYS8 371 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 AGXT2Q9BYV1 514 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 FBXO40Q9UH90 709 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 GABRQQ9UN88 632 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 ZNF236Q9UL36 1845 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 ZNF536O15090 1300 aa25.63■■□□□ 1.69
APOE-204ENST00000446996 XRCC5P13010 732 aaKnown RBP25.62■■□□□ 1.69
APOE-204ENST00000446996 CASTP20810 708 aaKnown RBP25.62■■□□□ 1.69
APOE-204ENST00000446996 SMARCA1P28370 1054 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 KIF5BP33176 963 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 RCAN1P53805 252 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 GRB14Q14449 540 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms