RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 TTC14Q96N46 770 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 PTPN18Q99952 460 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 AGTPBP1Q9UPW5 1226 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 WDR46O15213 610 aaKnown RBP11.91□□□□□ -0.5
LIN54-203ENST00000446851 INHBEP58166 350 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 RAET1EQ8TD07 263 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 LY9Q9HBG7 655 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 GPRC5AQ8NFJ5 357 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 TBC1D32Q96NH3 1257 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 RASSF10A6NK89 507 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 MYCLP12524 364 aaPredicted RBP11.9□□□□□ -0.5
LIN54-203ENST00000446851 HOXA13P31271 388 aaPredicted RBP11.9□□□□□ -0.5
LIN54-203ENST00000446851 ZNF76P36508 570 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 CDC37Q16543 378 aaPredicted RBP11.9□□□□□ -0.5
LIN54-203ENST00000446851 GPATCH4Q5T3I0 446 aaKnown RBP11.9□□□□□ -0.5
LIN54-203ENST00000446851 SMARCC2Q8TAQ2 1214 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 CD99L2Q8TCZ2 262 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 RNF186Q9NXI6 227 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 ZNF112Q9UJU3 913 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 PRR12Q9ULL5 1215 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 LTBP1Q14766 1721 aa11.9□□□□□ -0.5
LIN54-203ENST00000446851 ALDH1A1P00352 501 aa11.9□□□□□ -0.51
LIN54-203ENST00000446851 PGK2P07205 417 aa11.9□□□□□ -0.51
LIN54-203ENST00000446851 CALM1P0DP23 149 aa11.9□□□□□ -0.51
LIN54-203ENST00000446851 CALM2P0DP24 149 aa11.9□□□□□ -0.51
LIN54-203ENST00000446851 CALM3P0DP25 149 aa11.9□□□□□ -0.51
LIN54-203ENST00000446851 GNAQP50148 359 aa11.9□□□□□ -0.51
LIN54-203ENST00000446851 SP3Q02447 781 aa11.9□□□□□ -0.51
LIN54-203ENST00000446851 TICAM2Q86XR7 235 aa11.9□□□□□ -0.51
LIN54-203ENST00000446851 TPCN1Q9ULQ1 816 aa11.9□□□□□ -0.51
LIN54-203ENST00000446851 ANO1Q5XXA6 986 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 FBXO11Q86XK2 927 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 IGDCC4Q8TDY8 1250 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 CUL5Q93034 780 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 TCEAL9Q9UHQ7 104 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 XBP1P17861 261 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 MAP2K2P36507 400 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 ANAPC15P60006 121 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 FERMT3Q86UX7 667 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 ADGRF4Q8IZF3 695 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 WDR18Q9BV38 432 aa11.89□□□□□ -0.51
LIN54-203ENST00000446851 ERCC3P19447 782 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 ZNF543Q08ER8 600 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 VTI1AQ96AJ9 217 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 RNF146Q9NTX7 359 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 VPS54Q9P1Q0 977 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 FEM1BQ9UK73 627 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 JAK2O60674 1132 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 ZRSR1Q15695 479 aaKnown RBP11.88□□□□□ -0.51
LIN54-203ENST00000446851 JAKMIP3Q5VZ66 844 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 PGBD1Q96JS3 809 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 CDKL5O76039 1030 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 PDIA3P30101 505 aaKnown RBP11.88□□□□□ -0.51
LIN54-203ENST00000446851 SAFBQ15424 915 aaKnown RBP eCLIP11.88□□□□□ -0.51
LIN54-203ENST00000446851 ME3Q16798 604 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 ASPRV1Q53RT3 343 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 SIAH1Q8IUQ4 282 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 TRERF1Q96PN7 1200 aa11.88□□□□□ -0.51
LIN54-203ENST00000446851 DDX49Q9Y6V7 483 aaKnown RBP11.88□□□□□ -0.51
LIN54-203ENST00000446851 A0A0G2JLL6 359 aaPredicted RBP11.87□□□□□ -0.51
LIN54-203ENST00000446851 CEBPZQ03701 1054 aaKnown RBP11.87□□□□□ -0.51
LIN54-203ENST00000446851 QRICH1Q2TAL8 776 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 PRRT2Q7Z6L0 340 aaPredicted RBP11.87□□□□□ -0.51
LIN54-203ENST00000446851 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 NBPF11Q86T75 865 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 PROCA1Q8NCQ7 364 aaPredicted RBP11.87□□□□□ -0.51
LIN54-203ENST00000446851 AIFM3Q96NN9 605 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 LARGE1O95461 756 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 MAP3K11Q16584 847 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 DCAF4Q8WV16 495 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 TMX3Q96JJ7 454 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 MS4A4AQ96JQ5 239 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 ARHGAP39Q9C0H5 1083 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 PORCNQ9H237 461 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
LIN54-203ENST00000446851 KCNJ14Q9UNX9 436 aa11.87□□□□□ -0.51
LIN54-203ENST00000446851 POTEB2H3BUK9 544 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 CA12O43570 354 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 CDC27P30260 824 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 Q3C1V9 767 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 NOL9Q5SY16 702 aaKnown RBP11.86□□□□□ -0.51
LIN54-203ENST00000446851 CATSPERGQ6ZRH7 1159 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 FAM160B2Q86V87 743 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 TEX13BQ9BXU2 312 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 DICER1Q9UPY3 1922 aaKnown RBP11.86□□□□□ -0.51
LIN54-203ENST00000446851 GPR25O00155 361 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 ZNF296Q8WUU4 475 aaPredicted RBP11.86□□□□□ -0.51
LIN54-203ENST00000446851 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 KIF3AQ9Y496 699 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 SCN4AP35499 1836 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 SPDYE16A6NNV3 312 aaPredicted RBP11.86□□□□□ -0.51
LIN54-203ENST00000446851 LIFRP42702 1097 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 ARHGEF6Q15052 776 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 TXNRD2Q9NNW7 524 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 CEP290O15078 2479 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms