RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 V9GY48 417 aaPredicted RBP20.22■□□□□ 0.83
SGCE-206ENST00000445866 TESPA1A2RU30 521 aaPredicted RBP20.21■□□□□ 0.83
SGCE-206ENST00000445866 CDKL5O76039 1030 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 HSP90AA1P07900 732 aaKnown RBP20.21■□□□□ 0.83
SGCE-206ENST00000445866 IFNAR1P17181 557 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 SMARCA1P28370 1054 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 NOGQ13253 232 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 NTRK3Q16288 839 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 ADGRF4Q8IZF3 695 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 PHKBQ93100 1093 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 ZIC5Q96T25 663 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 PTPN18Q99952 460 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 SLF1Q9BQI6 1058 aa20.21■□□□□ 0.83
SGCE-206ENST00000445866 DAXXQ9UER7 740 aaPredicted RBP20.21■□□□□ 0.83
SGCE-206ENST00000445866 AOC2O75106 756 aa20.2■□□□□ 0.82
SGCE-206ENST00000445866 HSPA6P17066 643 aa20.2■□□□□ 0.82
SGCE-206ENST00000445866 OSBPP22059 807 aa20.2■□□□□ 0.82
SGCE-206ENST00000445866 SLC4A3P48751 1232 aa20.2■□□□□ 0.82
SGCE-206ENST00000445866 IRX3P78415 501 aaPredicted RBP20.2■□□□□ 0.82
SGCE-206ENST00000445866 AKAP17AQ02040 695 aaKnown RBP20.2■□□□□ 0.82
SGCE-206ENST00000445866 SSRP1Q08945 709 aaKnown RBP20.2■□□□□ 0.82
SGCE-206ENST00000445866 FUT2Q10981 343 aa20.2■□□□□ 0.82
SGCE-206ENST00000445866 ST3GAL1Q11201 340 aa20.2■□□□□ 0.82
SGCE-206ENST00000445866 CUL4AQ13619 759 aa20.2■□□□□ 0.82
SGCE-206ENST00000445866 ANKRD23Q86SG2 305 aa20.2■□□□□ 0.82
SGCE-206ENST00000445866 P2RX7Q99572 595 aaKnown RBP20.2■□□□□ 0.82
SGCE-206ENST00000445866 PDHXO00330 501 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 CTDNEP1O95476 244 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 SREBF2Q12772 1141 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 SLC35G1Q2M3R5 365 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 SPRYD3Q8NCJ5 442 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 LLPHQ9BRT6 129 aaKnown RBP20.19■□□□□ 0.82
SGCE-206ENST00000445866 SPZ1Q9BXG8 430 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 SLC26A6Q9BXS9 759 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 RIOX1Q9H6W3 641 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 JMJD4Q9H9V9 463 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 FOXD4L1Q9NU39 408 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 PRR12Q9ULL5 1215 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.19■□□□□ 0.82
SGCE-206ENST00000445866 NID2Q14112 1375 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 hCG_1642624A0A1W2PR95 340 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 CYTH3O43739 400 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 DSG3P32926 999 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 VEGFBP49765 207 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 SNAP25P60880 206 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 OTUD7BQ6GQQ9 843 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 RRP36Q96EU6 259 aaKnown RBP20.19■□□□□ 0.82
SGCE-206ENST00000445866 DDX11Q96FC9 970 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 ASCC2Q9H1I8 757 aaPredicted RBP20.19■□□□□ 0.82
SGCE-206ENST00000445866 PPP1R9AQ9ULJ8 1098 aa20.19■□□□□ 0.82
SGCE-206ENST00000445866 CTDP1Q9Y5B0 961 aaPredicted RBP20.19■□□□□ 0.82
SGCE-206ENST00000445866 WDR33Q9C0J8 1336 aaKnown RBP20.18■□□□□ 0.82
SGCE-206ENST00000445866 HOMER1Q86YM7 354 aa20.18■□□□□ 0.82
SGCE-206ENST00000445866 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
SGCE-206ENST00000445866 FAM43AQ8N2R8 423 aa20.18■□□□□ 0.82
SGCE-206ENST00000445866 NSUN7Q8NE18 718 aaKnown RBP20.18■□□□□ 0.82
SGCE-206ENST00000445866 PRPF3O43395 683 aaKnown RBP20.17■□□□□ 0.82
SGCE-206ENST00000445866 JAK2O60674 1132 aa20.17■□□□□ 0.82
SGCE-206ENST00000445866 ZBED4O75132 1171 aa20.17■□□□□ 0.82
SGCE-206ENST00000445866 TM4SF4P48230 202 aa20.17■□□□□ 0.82
SGCE-206ENST00000445866 PIGSQ96S52 555 aa20.17■□□□□ 0.82
SGCE-206ENST00000445866 ORC3Q9UBD5 711 aaPredicted RBP20.17■□□□□ 0.82
SGCE-206ENST00000445866 SMC3Q9UQE7 1217 aa20.17■□□□□ 0.82
SGCE-206ENST00000445866 SLC45A1Q9Y2W3 748 aa20.17■□□□□ 0.82
SGCE-206ENST00000445866 PTPDC1A2A3K4 754 aa20.16■□□□□ 0.82
SGCE-206ENST00000445866 FMNL1O95466 1100 aaPredicted RBP20.16■□□□□ 0.82
SGCE-206ENST00000445866 IFNL1Q8IU54 200 aa20.16■□□□□ 0.82
SGCE-206ENST00000445866 ATG4CQ96DT6 458 aa20.16■□□□□ 0.82
SGCE-206ENST00000445866 INTS4Q96HW7 963 aaKnown RBP20.16■□□□□ 0.82
SGCE-206ENST00000445866 PNMA3Q9UL41 463 aa20.16■□□□□ 0.82
SGCE-206ENST00000445866 IGF2BP3O00425 579 aaKnown RBP eCLIP20.16■□□□□ 0.82
SGCE-206ENST00000445866 VWA5AO00534 786 aa20.16■□□□□ 0.82
SGCE-206ENST00000445866 CYP2C8P10632 490 aa20.16■□□□□ 0.82
SGCE-206ENST00000445866 SEC63Q9UGP8 760 aaKnown RBP20.16■□□□□ 0.82
SGCE-206ENST00000445866 PNMA6FA0A0J9YX94 578 aa20.15■□□□□ 0.82
SGCE-206ENST00000445866 FDX1P10109 184 aa20.15■□□□□ 0.82
SGCE-206ENST00000445866 MAP2K2P36507 400 aa20.15■□□□□ 0.82
SGCE-206ENST00000445866 HERVK_113P62684 666 aa20.15■□□□□ 0.82
SGCE-206ENST00000445866 CCDC174Q6PII3 467 aa20.15■□□□□ 0.82
SGCE-206ENST00000445866 REM2Q8IYK8 340 aaPredicted RBP20.15■□□□□ 0.82
SGCE-206ENST00000445866 SMARCC2Q8TAQ2 1214 aa20.15■□□□□ 0.82
SGCE-206ENST00000445866 RNF26Q9BY78 433 aaPredicted RBP20.15■□□□□ 0.82
SGCE-206ENST00000445866 GREB1LQ9C091 1923 aaPredicted RBP20.15■□□□□ 0.82
SGCE-206ENST00000445866 SPDYE16A6NNV3 312 aaPredicted RBP20.14■□□□□ 0.81
SGCE-206ENST00000445866 ZBTB5O15062 677 aa20.14■□□□□ 0.81
SGCE-206ENST00000445866 HMGN5P82970 282 aaKnown RBP20.14■□□□□ 0.81
SGCE-206ENST00000445866 FAM184AQ8NB25 1140 aa20.14■□□□□ 0.81
SGCE-206ENST00000445866 MTMR8Q96EF0 704 aa20.14■□□□□ 0.81
SGCE-206ENST00000445866 SLC38A10Q9HBR0 1119 aa20.14■□□□□ 0.81
SGCE-206ENST00000445866 RBM27Q9P2N5 1060 aaKnown RBP20.14■□□□□ 0.81
SGCE-206ENST00000445866 ADAMTS5Q9UNA0 930 aa20.14■□□□□ 0.81
SGCE-206ENST00000445866 MYPNQ86TC9 1320 aa20.14■□□□□ 0.81
SGCE-206ENST00000445866 CNTNAP5Q8WYK1 1306 aa20.14■□□□□ 0.81
SGCE-206ENST00000445866 FDPSP14324 419 aaKnown RBP20.13■□□□□ 0.81
SGCE-206ENST00000445866 CDC37Q16543 378 aaPredicted RBP20.13■□□□□ 0.81
SGCE-206ENST00000445866 QRICH1Q2TAL8 776 aa20.13■□□□□ 0.81
SGCE-206ENST00000445866 CPXCR1Q8N123 301 aa20.13■□□□□ 0.81
SGCE-206ENST00000445866 SMCR8Q8TEV9 937 aaPredicted RBP20.13■□□□□ 0.81
SGCE-206ENST00000445866 RANBP17Q9H2T7 1088 aaKnown RBP20.13■□□□□ 0.81
SGCE-206ENST00000445866 DOCK1Q14185 1865 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms