RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 FLT1P17948 1338 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 ORC4O43929 436 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 PFKFB3Q16875 520 aaPredicted RBP11.9□□□□□ -0.5
CALD1-210ENST00000443197 PDCL2Q8N4E4 241 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 CACTINQ8WUQ7 758 aaKnown RBP11.9□□□□□ -0.5
CALD1-210ENST00000443197 PP2D1A8MPX8 630 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 GRIN1Q05586 938 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 HERC4Q5GLZ8 1057 aaPredicted RBP11.9□□□□□ -0.5
CALD1-210ENST00000443197 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
CALD1-210ENST00000443197 AKR1B10O60218 316 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 CYP4A11Q02928 519 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 DDR1Q08345 913 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 TBC1D8BQ0IIM8 1120 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 ZFYVE27Q5T4F4 411 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 FAM114A1Q8IWE2 563 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 CCDC17Q96LX7 622 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 SRRTQ9BXP5 876 aaKnown RBP11.89□□□□□ -0.51
CALD1-210ENST00000443197 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 KIF2AO00139 706 aaPredicted RBP11.89□□□□□ -0.51
CALD1-210ENST00000443197 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
CALD1-210ENST00000443197 KIF20AO95235 890 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 MYCLP12524 364 aaPredicted RBP11.89□□□□□ -0.51
CALD1-210ENST00000443197 DRC1Q96MC2 740 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 LRRC27Q9C0I9 530 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 PDCL3Q9H2J4 239 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 KANSL2Q9H9L4 492 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 SLC39A2Q9NP94 309 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 TMEM260Q9NX78 707 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 MAN1B1Q9UKM7 699 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 STK36Q9NRP7 1315 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 FAM170AA1A519 330 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 TROAPQ12815 778 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 CCDC93Q567U6 631 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 FBXO11Q86XK2 927 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 SAMSN1Q9NSI8 373 aaKnown RBP11.89□□□□□ -0.51
CALD1-210ENST00000443197 LMO7Q8WWI1 1683 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 USP8P40818 1118 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 AGXT2Q9BYV1 514 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 SWAP70Q9UH65 585 aa11.89□□□□□ -0.51
CALD1-210ENST00000443197 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.89□□□□□ -0.511e-6■■■□□ 17.8
CALD1-210ENST00000443197 FAM208AQ9UK61 1670 aaKnown RBP11.89□□□□□ -0.51
CALD1-210ENST00000443197 SLFN14P0C7P3 912 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 SYCP1Q15431 976 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 RESP18Q5W5W9 173 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 DDX25Q9UHL0 483 aaKnown RBP11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L15C9J2P7 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L13C9JLJ4 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 AKR1B15C9JRZ8 316 aaPredicted RBP11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L11C9JVI0 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L18D6R9N7 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L22D6RA61 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L17D6RBQ6 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L19D6RCP7 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L20D6RJB6 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 RASA1P20936 1047 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 HOXA13P31271 388 aaPredicted RBP11.88□□□□□ -0.51
CALD1-210ENST00000443197 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L24Q0WX57 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 GPATCH4Q5T3I0 446 aaKnown RBP11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L6PQ6QN14 398 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 RASGRP2Q7LDG7 609 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 AMIGO3Q86WK7 504 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 NOC4LQ9BVI4 516 aaKnown RBP11.88□□□□□ -0.51
CALD1-210ENST00000443197 USP17L10C9JJH3 530 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 TRAF1Q13077 416 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 CCDC181Q5TID7 509 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 LRRC8AQ8IWT6 810 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 NEDD1Q8NHV4 660 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 PRIMPOLQ96LW4 560 aa11.88□□□□□ -0.51
CALD1-210ENST00000443197 LUC7L2Q9Y383 392 aaKnown RBP11.88□□□□□ -0.51
CALD1-210ENST00000443197 ZNF142P52746 1687 aaPredicted RBP11.88□□□□□ -0.51
CALD1-210ENST00000443197 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
CALD1-210ENST00000443197 ALAS1P13196 640 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 EEF2P13639 858 aaKnown RBP11.87□□□□□ -0.51
CALD1-210ENST00000443197 SH2D4AQ9H788 454 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 BICDL2A1A5D9 508 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 U2AF2P26368 475 aaKnown RBP eCLIP11.87□□□□□ -0.518e-8■□□□□ 10.4
CALD1-210ENST00000443197 NFIAQ12857 509 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 GOLGA6L1Q8N7Z2 621 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 TIGD1Q96MW7 591 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 DESI2Q9BSY9 194 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 DHX36Q9H2U1 1008 aaKnown RBP11.87□□□□□ -0.51
CALD1-210ENST00000443197 SORBS3O60504 671 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 LONP1P36776 959 aaKnown RBP11.87□□□□□ -0.51
CALD1-210ENST00000443197 TRAPPC10P48553 1259 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 CDC42EP5Q6NZY7 148 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 TPH2Q8IWU9 490 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 PAGE5Q96GU1 130 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 MRFAP1L1Q96HT8 127 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 PICK1Q9NRD5 415 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 GUCA1BQ9UMX6 200 aa11.87□□□□□ -0.51
CALD1-210ENST00000443197 FAM13AO94988 1023 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 KRT9P35527 623 aa11.86□□□□□ -0.51
CALD1-210ENST00000443197 SBK1Q52WX2 424 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms