RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 RAD50Q92878 1312 aa26.14■■□□□ 1.78
HDLBP-220ENST00000442730 FCER1AP12319 257 aa26.14■■□□□ 1.78
HDLBP-220ENST00000442730 CCND3P30281 292 aaPredicted RBP26.14■■□□□ 1.78
HDLBP-220ENST00000442730 SLC1A4P43007 532 aa26.14■■□□□ 1.78
HDLBP-220ENST00000442730 MFSD14CQ5VZR4 134 aa26.14■■□□□ 1.78
HDLBP-220ENST00000442730 RNF41Q9H4P4 317 aaPredicted RBP26.14■■□□□ 1.78
HDLBP-220ENST00000442730 SLC38A10Q9HBR0 1119 aa26.14■■□□□ 1.78
HDLBP-220ENST00000442730 TCP11L1Q9NUJ3 509 aa26.14■■□□□ 1.78
HDLBP-220ENST00000442730 TMEM232C9JQI7 657 aa26.13■■□□□ 1.77
HDLBP-220ENST00000442730 ZNF213O14771 459 aa26.13■■□□□ 1.77
HDLBP-220ENST00000442730 ATP2A1O14983 1001 aa26.13■■□□□ 1.77
HDLBP-220ENST00000442730 MCCP23508 829 aa26.13■■□□□ 1.77
HDLBP-220ENST00000442730 OLFML2BQ68BL8 750 aa26.13■■□□□ 1.77
HDLBP-220ENST00000442730 SNRNP48Q6IEG0 339 aaKnown RBP26.13■■□□□ 1.77
HDLBP-220ENST00000442730 ISY1Q9ULR0 285 aaKnown RBP26.13■■□□□ 1.77
HDLBP-220ENST00000442730 ZBED4O75132 1171 aa26.12■■□□□ 1.77
HDLBP-220ENST00000442730 CHMLP26374 656 aa26.12■■□□□ 1.77
HDLBP-220ENST00000442730 CYP2C19P33261 490 aa26.12■■□□□ 1.77
HDLBP-220ENST00000442730 STAT2P52630 851 aa26.12■■□□□ 1.77
HDLBP-220ENST00000442730 CHMP4CQ96CF2 233 aa26.12■■□□□ 1.77
HDLBP-220ENST00000442730 MMP19Q99542 508 aa26.12■■□□□ 1.77
HDLBP-220ENST00000442730 TOP1P11387 765 aaKnown RBP26.11■■□□□ 1.77
HDLBP-220ENST00000442730 TMEM47Q9BQJ4 181 aa26.11■■□□□ 1.77
HDLBP-220ENST00000442730 SLC5A4Q9NY91 659 aa26.11■■□□□ 1.77
HDLBP-220ENST00000442730 RIPK3Q9Y572 518 aa26.11■■□□□ 1.77
HDLBP-220ENST00000442730 KCTD2Q14681 263 aa26.1■■□□□ 1.77
HDLBP-220ENST00000442730 RCSD1Q6JBY9 416 aa26.1■■□□□ 1.77
HDLBP-220ENST00000442730 KCTD1Q719H9 257 aa26.1■■□□□ 1.77
HDLBP-220ENST00000442730 FAM160B2Q86V87 743 aa26.1■■□□□ 1.77
HDLBP-220ENST00000442730 ANKLE1Q8NAG6 615 aa26.1■■□□□ 1.77
HDLBP-220ENST00000442730 DIS3LQ8TF46 1054 aaKnown RBP26.1■■□□□ 1.77
HDLBP-220ENST00000442730 ESR2Q92731 530 aa26.1■■□□□ 1.77
HDLBP-220ENST00000442730 RAVER2Q9HCJ3 691 aaKnown RBP26.1■■□□□ 1.77
HDLBP-220ENST00000442730 CTNNA3Q9UI47 895 aa26.1■■□□□ 1.77
HDLBP-220ENST00000442730 OGDHLQ9ULD0 1010 aa26.1■■□□□ 1.77
HDLBP-220ENST00000442730 PLA2G6O60733 806 aa26.09■■□□□ 1.77
HDLBP-220ENST00000442730 PGK2P07205 417 aa26.09■■□□□ 1.77
HDLBP-220ENST00000442730 OAZ1P54368 228 aa26.09■■□□□ 1.77
HDLBP-220ENST00000442730 IMMTQ16891 758 aaKnown RBP26.09■■□□□ 1.77
HDLBP-220ENST00000442730 LHX8Q68G74 356 aa26.09■■□□□ 1.77
HDLBP-220ENST00000442730 CPXCR1Q8N123 301 aa26.09■■□□□ 1.77
HDLBP-220ENST00000442730 TRPV1Q8NER1 839 aa26.09■■□□□ 1.77
HDLBP-220ENST00000442730 CHURC1Q8WUH1 139 aa26.09■■□□□ 1.77
HDLBP-220ENST00000442730 DCAF4Q8WV16 495 aa26.09■■□□□ 1.77
HDLBP-220ENST00000442730 MAML3Q96JK9 1138 aa26.09■■□□□ 1.77
HDLBP-220ENST00000442730 CTDP1Q9Y5B0 961 aaPredicted RBP26.09■■□□□ 1.77
HDLBP-220ENST00000442730 CYBAP13498 195 aa26.08■■□□□ 1.77
HDLBP-220ENST00000442730 NT5C2P49902 561 aa26.08■■□□□ 1.77
HDLBP-220ENST00000442730 MNX1P50219 401 aaPredicted RBP26.08■■□□□ 1.77
HDLBP-220ENST00000442730 IKQ13123 557 aaPredicted RBP26.08■■□□□ 1.77
HDLBP-220ENST00000442730 CENPQQ7L2Z9 268 aaPredicted RBP26.08■■□□□ 1.77
HDLBP-220ENST00000442730 RUFY2Q8WXA3 655 aa26.08■■□□□ 1.77
HDLBP-220ENST00000442730 MTMR7Q9Y216 660 aa26.08■■□□□ 1.77
HDLBP-220ENST00000442730 NEFLP07196 543 aa26.07■■□□□ 1.76
HDLBP-220ENST00000442730 FDX1P10109 184 aa26.07■■□□□ 1.76
HDLBP-220ENST00000442730 CCDC96Q2M329 555 aa26.07■■□□□ 1.76
HDLBP-220ENST00000442730 PAWRQ96IZ0 340 aaKnown RBP26.07■■□□□ 1.76
HDLBP-220ENST00000442730 HTATIP2Q9BUP3 242 aa26.07■■□□□ 1.76
HDLBP-220ENST00000442730 CEP290O15078 2479 aa26.07■■□□□ 1.76
HDLBP-220ENST00000442730 FRMPD3Q5JV73 1810 aa26.07■■□□□ 1.76
HDLBP-220ENST00000442730 KDM4AO75164 1064 aa26.06■■□□□ 1.76
HDLBP-220ENST00000442730 ZNF792Q3KQV3 632 aa26.06■■□□□ 1.76
HDLBP-220ENST00000442730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.06■■□□□ 1.76
HDLBP-220ENST00000442730 TTC14Q96N46 770 aa26.06■■□□□ 1.76
HDLBP-220ENST00000442730 ZNF536O15090 1300 aa26.06■■□□□ 1.76
HDLBP-220ENST00000442730 SGSM2O43147 1006 aa26.05■■□□□ 1.76
HDLBP-220ENST00000442730 SLC4A3P48751 1232 aa26.05■■□□□ 1.76
HDLBP-220ENST00000442730 NECAB2Q7Z6G3 386 aa26.05■■□□□ 1.76
HDLBP-220ENST00000442730 ZKSCAN3Q9BRR0 538 aa26.05■■□□□ 1.76
HDLBP-220ENST00000442730 DDX20Q9UHI6 824 aaKnown RBP26.05■■□□□ 1.76
HDLBP-220ENST00000442730 PRR12Q9ULL5 1215 aa26.05■■□□□ 1.76
HDLBP-220ENST00000442730 DIS3Q9Y2L1 958 aaKnown RBP26.05■■□□□ 1.76
HDLBP-220ENST00000442730 B4E1Z4 1266 aa26.04■■□□□ 1.76
HDLBP-220ENST00000442730 PLXNA1Q9UIW2 1896 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 DNAJC25-GNG10A0A024R161 153 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 PDHBP11177 359 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 CNGA1P29973 690 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 PTH1RQ03431 593 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 TTBK2Q6IQ55 1244 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 SKAP1Q86WV1 359 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 DGKHQ86XP1 1220 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 CHST13Q8NET6 341 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 FBXO40Q9UH90 709 aa26.03■■□□□ 1.76
HDLBP-220ENST00000442730 FRMPD2Q68DX3 1309 aaPredicted RBP26.03■■□□□ 1.76
HDLBP-220ENST00000442730 ZNFX1Q9P2E3 1918 aaKnown RBP26.02■■□□□ 1.76
HDLBP-220ENST00000442730 MSCO60682 206 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 SNHG28P0DPA3 235 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 SNAP25P60880 206 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 BTNL9Q6UXG8 535 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 IQCA1Q86XH1 822 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 DPF3Q92784 378 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 AGBL1Q96MI9 1066 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 TINF2Q9BSI4 451 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 KRT23Q9C075 422 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 CNNM2Q9H8M5 875 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 HOMER2Q9NSB8 354 aa26.02■■□□□ 1.76
HDLBP-220ENST00000442730 CCDC174Q6PII3 467 aa26.01■■□□□ 1.75
HDLBP-220ENST00000442730 ZSCAN10Q96SZ4 725 aaPredicted RBP26.01■■□□□ 1.75
HDLBP-220ENST00000442730 H0YGN5 161 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 SLC16A2P36021 539 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms