RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 KLHDC9Q8NEP7 349 aa12.13□□□□□ -0.47
HDLBP-219ENST00000442714 NEDD1Q8NHV4 660 aa12.13□□□□□ -0.47
HDLBP-219ENST00000442714 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
HDLBP-219ENST00000442714 TSEN34Q9BSV6 310 aaKnown RBP12.13□□□□□ -0.47
HDLBP-219ENST00000442714 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
HDLBP-219ENST00000442714 ZNF287Q9HBT7 754 aa12.13□□□□□ -0.47
HDLBP-219ENST00000442714 PDLIM7Q9NR12 457 aa12.13□□□□□ -0.47
HDLBP-219ENST00000442714 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
HDLBP-219ENST00000442714 TACC3Q9Y6A5 838 aa12.13□□□□□ -0.47
HDLBP-219ENST00000442714 DDX60LQ5H9U9 1706 aaKnown RBP12.13□□□□□ -0.47
HDLBP-219ENST00000442714 ADAMTS4O75173 837 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 C9orf50Q5SZB4 431 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 SNRNP48Q6IEG0 339 aaKnown RBP12.12□□□□□ -0.47
HDLBP-219ENST00000442714 ZNF467Q7Z7K2 595 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-219ENST00000442714 GMCL1P1Q8NEA9 526 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 CEP95Q96GE4 821 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 TOX2Q96NM4 488 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 GUCD1Q96NT3 240 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 SEC62Q99442 399 aaKnown RBP12.12□□□□□ -0.47
HDLBP-219ENST00000442714 SEMA6BQ9H3T3 888 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 FEM1BQ9UK73 627 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 FAM184BQ9ULE4 1060 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
HDLBP-219ENST00000442714 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 RLFQ13129 1914 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 ROBO3Q96MS0 1386 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 TTLL1O95922 423 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 AKR1A1P14550 325 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 ACLYP53396 1101 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 KCNA10Q16322 511 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 LRRFIP1Q32MZ4 808 aaKnown RBP12.11□□□□□ -0.47
HDLBP-219ENST00000442714 ANKRD33Q7Z3H0 272 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 CPXCR1Q8N123 301 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 OTUD7AQ8TE49 926 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-219ENST00000442714 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 RAVER2Q9HCJ3 691 aaKnown RBP12.11□□□□□ -0.47
HDLBP-219ENST00000442714 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-219ENST00000442714 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
HDLBP-219ENST00000442714 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-219ENST00000442714 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 DUSP11O75319 330 aaKnown RBP12.1□□□□□ -0.47
HDLBP-219ENST00000442714 BMP3P12645 472 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 TDO2P48775 406 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 CDK7P50613 346 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 OAZ1P54368 228 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 EPHB4P54760 987 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 TFAP4Q01664 338 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 FAAP100Q0VG06 881 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 ACVR2BQ13705 512 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 ZMYM1Q5SVZ6 1142 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 SLFN13Q68D06 897 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 CHST13Q8NET6 341 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 FGD4Q96M96 766 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 NACAP1Q9BZK3 213 aa12.1□□□□□ -0.47
HDLBP-219ENST00000442714 ERC2O15083 957 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 FOXP2O15409 715 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 CLTBP09497 229 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 FDX1P10109 184 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 SMAD3P84022 425 aaKnown RBP12.09□□□□□ -0.47
HDLBP-219ENST00000442714 PDE4BQ07343 736 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 ANKRD35Q8N283 1001 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 NUP133Q8WUM0 1156 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 LENG1Q96BZ8 264 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-219ENST00000442714 CDX2Q99626 313 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-219ENST00000442714 ABHD16BQ9H3Z7 469 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 INCENPQ9NQS7 918 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 FBXO40Q9UH90 709 aa12.09□□□□□ -0.47
HDLBP-219ENST00000442714 MOXD2PA6NHM9 499 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 TMEM232C9JQI7 657 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 PLA2G6O60733 806 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 TSPY3P0CV98 308 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 TSPY8P0CW00 308 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 MCCP23508 829 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 NKX3-2P78367 333 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-219ENST00000442714 CNTN2Q02246 1040 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 PPARAQ07869 468 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 CCDC144BQ3MJ40 725 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 CHURC1Q8WUH1 139 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 GMCL1Q96IK5 515 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 FAM161BQ96MY7 647 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 KATNBL1Q9H079 304 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 IL17RBQ9NRM6 502 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-219ENST00000442714 CTDP1Q9Y5B0 961 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-219ENST00000442714 ZNF536O15090 1300 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 ELP1O95163 1332 aa12.08□□□□□ -0.48
HDLBP-219ENST00000442714 MYADML2A6NDP7 307 aa12.07□□□□□ -0.48
HDLBP-219ENST00000442714 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
HDLBP-219ENST00000442714 CTAGE5O15320 804 aa12.07□□□□□ -0.48
HDLBP-219ENST00000442714 ADCY6O43306 1168 aa12.07□□□□□ -0.48
HDLBP-219ENST00000442714 PQBP1O60828 265 aaKnown RBP12.07□□□□□ -0.48
HDLBP-219ENST00000442714 SLC3A2P08195 630 aaKnown RBP12.07□□□□□ -0.48
HDLBP-219ENST00000442714 FGRP09769 529 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms