RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 ANKRD33Q7Z3H0 272 aa15.4■□□□□ 0.06
TRIM13-205ENST00000442421 TSEN34Q9BSV6 310 aaKnown RBP15.4■□□□□ 0.06
TRIM13-205ENST00000442421 REV3LO60673 3130 aa15.4■□□□□ 0.06
TRIM13-205ENST00000442421 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.39■□□□□ 0.05
TRIM13-205ENST00000442421 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.39■□□□□ 0.05
TRIM13-205ENST00000442421 SNAI1O95863 264 aaPredicted RBP15.39■□□□□ 0.05
TRIM13-205ENST00000442421 COPB2P35606 906 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 KCNA10Q16322 511 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 SNRNP48Q6IEG0 339 aaKnown RBP15.39■□□□□ 0.05
TRIM13-205ENST00000442421 CTR9Q6PD62 1173 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 KLHDC9Q8NEP7 349 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 NUP133Q8WUM0 1156 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 SYMPKQ92797 1274 aaKnown RBP15.39■□□□□ 0.05
TRIM13-205ENST00000442421 TOX2Q96NM4 488 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.39■□□□□ 0.058e-10■■■□□ 19.2
TRIM13-205ENST00000442421 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRIM13-205ENST00000442421 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRIM13-205ENST00000442421 ZNF576Q9H609 170 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 CHD7Q9P2D1 2997 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 ZHX1Q9UKY1 873 aaPredicted RBP15.39■□□□□ 0.05
TRIM13-205ENST00000442421 RIPK3Q9Y572 518 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 SLC4A4Q9Y6R1 1079 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 ZBED9Q6R2W3 1325 aa15.39■□□□□ 0.05
TRIM13-205ENST00000442421 TIMP1P01033 207 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 SLC4A3P48751 1232 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 HNRNPUQ00839 825 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRIM13-205ENST00000442421 CCSAPQ6IQ19 270 aaPredicted RBP15.38■□□□□ 0.05
TRIM13-205ENST00000442421 TIFAQ96CG3 184 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 DDX11Q96FC9 970 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 DDRGK1Q96HY6 314 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 SLF1Q9BQI6 1058 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 TEX13BQ9BXU2 312 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 TBX21Q9UL17 535 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 FAM184BQ9ULE4 1060 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 SYNGAP1Q96PV0 1343 aa15.38■□□□□ 0.05
TRIM13-205ENST00000442421 NCOR1O75376 2440 aa15.37■□□□□ 0.05
TRIM13-205ENST00000442421 DNAJC25-GNG10A0A024R161 153 aa15.37■□□□□ 0.05
TRIM13-205ENST00000442421 MOXD2PA6NHM9 499 aa15.37■□□□□ 0.05
TRIM13-205ENST00000442421 ADCY6O43306 1168 aa15.37■□□□□ 0.05
TRIM13-205ENST00000442421 ATP5JP18859 108 aa15.37■□□□□ 0.05
TRIM13-205ENST00000442421 SIRT2Q8IXJ6 389 aa15.37■□□□□ 0.05
TRIM13-205ENST00000442421 STK11IPQ8N1F8 1099 aa15.37■□□□□ 0.05
TRIM13-205ENST00000442421 HAUS7Q99871 368 aa15.37■□□□□ 0.05
TRIM13-205ENST00000442421 GRXCR1A8MXD5 290 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 DUSP11O75319 330 aaKnown RBP15.36■□□□□ 0.05
TRIM13-205ENST00000442421 C6orf222P0C671 652 aaPredicted RBP15.36■□□□□ 0.05
TRIM13-205ENST00000442421 PBX2P40425 430 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 UBE3CQ15386 1083 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 TJAP1Q5JTD0 557 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 MFSD5Q6N075 450 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 MAMDC4Q6UXC1 1216 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 C16orf59Q7L2K0 433 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 CPXCR1Q8N123 301 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 MSL3Q8N5Y2 521 aaKnown RBP15.36■□□□□ 0.05
TRIM13-205ENST00000442421 PPM1EQ8WY54 764 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 GLT1D1Q96MS3 346 aa15.36■□□□□ 0.05
TRIM13-205ENST00000442421 PUS7LQ9H0K6 701 aaKnown RBP15.36■□□□□ 0.05
TRIM13-205ENST00000442421 LRRC37A2A6NM11 1700 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 F5H6K3 240 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 HMMRO75330 724 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 NDUFB10O96000 172 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 ASGR1P07306 291 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 CSF2RAP15509 400 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 RASA1P20936 1047 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 KLRC3Q07444 240 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 PPIGQ13427 754 aaKnown RBP eCLIP15.35■□□□□ 0.056e-7■□□□□ 9.7
TRIM13-205ENST00000442421 ACVR2BQ13705 512 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 TMEM240Q5SV17 173 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 CCDC129Q6ZRS4 1044 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 RPAP2Q8IXW5 612 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-205ENST00000442421 VTI1AQ96AJ9 217 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 PBX4Q9BYU1 374 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 PPP1R12CQ9BZL4 782 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-205ENST00000442421 ARPP21Q9UBL0 812 aaPredicted RBP15.35■□□□□ 0.05
TRIM13-205ENST00000442421 MROH7Q68CQ1 1323 aa15.35■□□□□ 0.05
TRIM13-205ENST00000442421 RAB11FIP3O75154 756 aa15.34■□□□□ 0.05
TRIM13-205ENST00000442421 ACRP10323 421 aa15.34■□□□□ 0.05
TRIM13-205ENST00000442421 CST5P28325 142 aaPredicted RBP15.34■□□□□ 0.05
TRIM13-205ENST00000442421 CDK7P50613 346 aa15.34■□□□□ 0.05
TRIM13-205ENST00000442421 CCDC144BQ3MJ40 725 aa15.34■□□□□ 0.05
TRIM13-205ENST00000442421 ZNF467Q7Z7K2 595 aaPredicted RBP15.34■□□□□ 0.05
TRIM13-205ENST00000442421 PRPF38AQ8NAV1 312 aaKnown RBP15.34■□□□□ 0.05
TRIM13-205ENST00000442421 KIFC2Q96AC6 838 aa15.34■□□□□ 0.05
TRIM13-205ENST00000442421 FGD4Q96M96 766 aa15.34■□□□□ 0.05
TRIM13-205ENST00000442421 PRDM12Q9H4Q4 367 aa15.34■□□□□ 0.05
TRIM13-205ENST00000442421 RAVER2Q9HCJ3 691 aaKnown RBP15.34■□□□□ 0.05
TRIM13-205ENST00000442421 TCF20Q9UGU0 1960 aaKnown RBP15.34■□□□□ 0.05
TRIM13-205ENST00000442421 ELP1O95163 1332 aa15.34■□□□□ 0.05
TRIM13-205ENST00000442421 XIRP2A4UGR9 3374 aa15.33■□□□□ 0.05
TRIM13-205ENST00000442421 TNFRSF10AO00220 468 aa15.33■□□□□ 0.04
TRIM13-205ENST00000442421 RASIP1Q5U651 963 aa15.33■□□□□ 0.04
TRIM13-205ENST00000442421 ZNF365Q70YC5 407 aa15.33■□□□□ 0.04
TRIM13-205ENST00000442421 ANKRD35Q8N283 1001 aa15.33■□□□□ 0.04
TRIM13-205ENST00000442421 PCSK9Q8NBP7 692 aaKnown RBP15.33■□□□□ 0.04
TRIM13-205ENST00000442421 GAS2L1Q99501 681 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-205ENST00000442421 UPF3AQ9H1J1 476 aaKnown RBP15.33■□□□□ 0.04
TRIM13-205ENST00000442421 MKNK2Q9HBH9 465 aa15.33■□□□□ 0.04
TRIM13-205ENST00000442421 NYAP2Q9P242 653 aa15.33■□□□□ 0.04
TRIM13-205ENST00000442421 CTDP1Q9Y5B0 961 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms