RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RIOX2Q8IUF8 465 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 KCNB2Q92953 911 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 KIFC2Q96AC6 838 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 ARMC5Q96C12 935 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 NUDT12Q9BQG2 462 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 SLC38A10Q9HBR0 1119 aa17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 ZNF214Q9UL59 606 aaPredicted RBP17.63■□□□□ 0.41
CSNK1E-210ENST00000442216 MYH6P13533 1939 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 RBBP6Q7Z6E9 1792 aaKnown RBP17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 SLC15A5A6NIM6 579 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 IFIT3O14879 490 aaKnown RBP17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 EIF5BO60841 1220 aaKnown RBP17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 MCM5P33992 734 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 STAT3P40763 770 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 ZNF543Q08ER8 600 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 PLS1Q14651 629 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 CCDC96Q2M329 555 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 SLC9C1Q4G0N8 1177 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 MORN1Q5T089 497 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 SLAIN1Q8ND83 568 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 CWC22Q9HCG8 908 aaKnown RBP17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 ISY1Q9ULR0 285 aaKnown RBP17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 CTDP1Q9Y5B0 961 aaPredicted RBP17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 IVNS1ABPQ9Y6Y0 642 aa17.62■□□□□ 0.41
CSNK1E-210ENST00000442216 XRCC5P13010 732 aaKnown RBP17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 ERCC3P19447 782 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 PTPREP23469 700 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 GRK4P32298 578 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 HSPA4P34932 840 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 ANTXR2P58335 489 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 IKQ13123 557 aaPredicted RBP17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 WTAPQ15007 396 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 ABRAQ8N0Z2 381 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 USP6NLQ92738 828 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 TMEM87BQ96K49 555 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 TEX13BQ9BXU2 312 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 MTMR7Q9Y216 660 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 PLXNA1Q9UIW2 1896 aa17.61■□□□□ 0.41
CSNK1E-210ENST00000442216 ADCY3O60266 1144 aa17.6■□□□□ 0.41
CSNK1E-210ENST00000442216 GRB14Q14449 540 aa17.6■□□□□ 0.41
CSNK1E-210ENST00000442216 ASPRV1Q53RT3 343 aa17.6■□□□□ 0.41
CSNK1E-210ENST00000442216 TRMT44Q8IYL2 757 aaKnown RBP17.6■□□□□ 0.41
CSNK1E-210ENST00000442216 TMTC2Q8N394 836 aa17.6■□□□□ 0.41
CSNK1E-210ENST00000442216 IGDCC4Q8TDY8 1250 aa17.6■□□□□ 0.41
CSNK1E-210ENST00000442216 PRR12Q9ULL5 1215 aa17.6■□□□□ 0.41
CSNK1E-210ENST00000442216 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
CSNK1E-210ENST00000442216 FRMPD2Q68DX3 1309 aaPredicted RBP17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 PRC1O43663 620 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 RGS2P41220 211 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 MAP2K5Q13163 448 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 TMEM67Q5HYA8 995 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 SYDE2Q5VT97 1194 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 WDR78Q5VTH9 848 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 RASGRP2Q7LDG7 609 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 NCAPG2Q86XI2 1143 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 ZNF333Q96JL9 665 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 NEK1Q96PY6 1258 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 PNMA2Q9UL42 364 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 SMCHD1A6NHR9 2005 aa17.59■□□□□ 0.41
CSNK1E-210ENST00000442216 HOXC6P09630 235 aa17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 PARP1P09874 1014 aaKnown RBP17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 LIFRP42702 1097 aa17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 TKFCQ3LXA3 575 aa17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 SNRNP48Q6IEG0 339 aaKnown RBP17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 TTBK2Q6IQ55 1244 aa17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 CHST3Q7LGC8 479 aa17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 CHST13Q8NET6 341 aa17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 APBA2Q99767 749 aa17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 USP26Q9BXU7 913 aa17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 GPCPD1Q9NPB8 672 aa17.58■□□□□ 0.4
CSNK1E-210ENST00000442216 ZNF536O15090 1300 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 CCDC85CA6NKD9 419 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 FCER1AP12319 257 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 UBXN2AP68543 259 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 IFFO2Q5TF58 517 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 DHX32Q7L7V1 743 aaKnown RBP17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 CPXCR1Q8N123 301 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 CHMP4CQ96CF2 233 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 MAP3K14Q99558 947 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 LY9Q9HBG7 655 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 RAVER2Q9HCJ3 691 aaKnown RBP17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 SLC5A4Q9NY91 659 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 FBXO40Q9UH90 709 aa17.57■□□□□ 0.4
CSNK1E-210ENST00000442216 SH2B2O14492 632 aaPredicted RBP17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 HMGCRP04035 888 aa17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 CYP2B6P20813 491 aa17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 SLC16A2P36021 539 aa17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 EXOSC10Q01780 885 aaKnown RBP17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 TROAPQ12815 778 aa17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 ADCK5Q3MIX3 580 aa17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 CATIPQ7Z7H3 387 aa17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 SH3TC2Q8TF17 1288 aa17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 SNX14Q9Y5W7 946 aa17.56■□□□□ 0.4
CSNK1E-210ENST00000442216 PALM3A6NDB9 673 aaPredicted RBP17.55■□□□□ 0.4
CSNK1E-210ENST00000442216 ICAM1P05362 532 aa17.55■□□□□ 0.4
CSNK1E-210ENST00000442216 ADORA2AP29274 412 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms