RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 DIS3LQ8TF46 1054 aaKnown RBP21.51■■□□□ 1.03
SMPD4-210ENST00000441135 ZNF214Q9UL59 606 aaPredicted RBP21.51■■□□□ 1.03
SMPD4-210ENST00000441135 TACC3Q9Y6A5 838 aa21.51■■□□□ 1.03
SMPD4-210ENST00000441135 MYH4Q9Y623 1939 aa21.51■■□□□ 1.03
SMPD4-210ENST00000441135 MSCO60682 206 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 IGHA2P01877 340 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 STAT3P40763 770 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 FAM47AQ5JRC9 791 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 MFSD6Q6ZSS7 791 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 TBC1D10CQ8IV04 446 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 LRRC47Q8N1G4 583 aaKnown RBP21.5■■□□□ 1.03
SMPD4-210ENST00000441135 PRPF38AQ8NAV1 312 aaKnown RBP21.5■■□□□ 1.03
SMPD4-210ENST00000441135 REPS2Q8NFH8 660 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 TEX13BQ9BXU2 312 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 TCP11L1Q9NUJ3 509 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 CEP290O15078 2479 aa21.5■■□□□ 1.03
SMPD4-210ENST00000441135 EVI5O60447 810 aa21.49■■□□□ 1.03
SMPD4-210ENST00000441135 COBLO75128 1261 aa21.49■■□□□ 1.03
SMPD4-210ENST00000441135 HAND2P61296 217 aa21.49■■□□□ 1.03
SMPD4-210ENST00000441135 LHX8Q68G74 356 aa21.49■■□□□ 1.03
SMPD4-210ENST00000441135 SKAP1Q86WV1 359 aa21.49■■□□□ 1.03
SMPD4-210ENST00000441135 RANBP6O60518 1105 aaKnown RBP21.48■■□□□ 1.03
SMPD4-210ENST00000441135 CYP2C19P33261 490 aa21.48■■□□□ 1.03
SMPD4-210ENST00000441135 MNX1P50219 401 aaPredicted RBP21.48■■□□□ 1.03
SMPD4-210ENST00000441135 KCTD2Q14681 263 aa21.48■■□□□ 1.03
SMPD4-210ENST00000441135 HABP4Q5JVS0 413 aaKnown RBP21.48■■□□□ 1.03
SMPD4-210ENST00000441135 MMP19Q99542 508 aa21.48■■□□□ 1.03
SMPD4-210ENST00000441135 C11orf49Q9H6J7 331 aa21.48■■□□□ 1.03
SMPD4-210ENST00000441135 DDX20Q9UHI6 824 aaKnown RBP21.48■■□□□ 1.03
SMPD4-210ENST00000441135 FEM1BQ9UK73 627 aa21.48■■□□□ 1.03
SMPD4-210ENST00000441135 U3KPZ7 1027 aaPredicted RBP21.48■■□□□ 1.03
SMPD4-210ENST00000441135 ATP2A1O14983 1001 aa21.47■■□□□ 1.03
SMPD4-210ENST00000441135 CYBAP13498 195 aa21.47■■□□□ 1.03
SMPD4-210ENST00000441135 SLFN13Q68D06 897 aa21.47■■□□□ 1.03
SMPD4-210ENST00000441135 ESR2Q92731 530 aa21.47■■□□□ 1.03
SMPD4-210ENST00000441135 GMCL1Q96IK5 515 aa21.47■■□□□ 1.03
SMPD4-210ENST00000441135 ESYT1Q9BSJ8 1104 aa21.47■■□□□ 1.03
SMPD4-210ENST00000441135 INCENPQ9NQS7 918 aa21.47■■□□□ 1.03
SMPD4-210ENST00000441135 IL17RBQ9NRM6 502 aa21.47■■□□□ 1.03
SMPD4-210ENST00000441135 CTDP1Q9Y5B0 961 aaPredicted RBP21.47■■□□□ 1.03
SMPD4-210ENST00000441135 ZBED4O75132 1171 aa21.46■■□□□ 1.03
SMPD4-210ENST00000441135 BMP3P12645 472 aa21.46■■□□□ 1.03
SMPD4-210ENST00000441135 CNGA1P29973 690 aa21.46■■□□□ 1.03
SMPD4-210ENST00000441135 SNRNP48Q6IEG0 339 aaKnown RBP21.46■■□□□ 1.03
SMPD4-210ENST00000441135 CASC1Q6TDU7 716 aa21.46■■□□□ 1.03
SMPD4-210ENST00000441135 MAP4K1Q92918 833 aa21.46■■□□□ 1.03
SMPD4-210ENST00000441135 MAML3Q96JK9 1138 aa21.46■■□□□ 1.03
SMPD4-210ENST00000441135 CNNM2Q9H8M5 875 aa21.46■■□□□ 1.03
SMPD4-210ENST00000441135 TOMM22Q9NS69 142 aa21.46■■□□□ 1.03
SMPD4-210ENST00000441135 STX8Q9UNK0 236 aa21.46■■□□□ 1.03
SMPD4-210ENST00000441135 CDC45O75419 566 aa21.45■■□□□ 1.02
SMPD4-210ENST00000441135 FDX1P10109 184 aa21.45■■□□□ 1.02
SMPD4-210ENST00000441135 PTH1RQ03431 593 aa21.45■■□□□ 1.02
SMPD4-210ENST00000441135 CCDC178Q5BJE1 867 aa21.45■■□□□ 1.02
SMPD4-210ENST00000441135 KIFC2Q96AC6 838 aa21.45■■□□□ 1.02
SMPD4-210ENST00000441135 TTC14Q96N46 770 aa21.45■■□□□ 1.02
SMPD4-210ENST00000441135 SLC38A10Q9HBR0 1119 aa21.45■■□□□ 1.02
SMPD4-210ENST00000441135 COLQQ9Y215 455 aaPredicted RBP21.45■■□□□ 1.02
SMPD4-210ENST00000441135 DIS3Q9Y2L1 958 aaKnown RBP21.45■■□□□ 1.02
SMPD4-210ENST00000441135 NEDD4P46934 1319 aa21.45■■□□□ 1.02
SMPD4-210ENST00000441135 COL11A1P12107 1806 aaPredicted RBP21.44■■□□□ 1.02
SMPD4-210ENST00000441135 SLC1A4P43007 532 aa21.44■■□□□ 1.02
SMPD4-210ENST00000441135 OAZ1P54368 228 aa21.44■■□□□ 1.02
SMPD4-210ENST00000441135 RRP12Q5JTH9 1297 aaKnown RBP21.44■■□□□ 1.02
SMPD4-210ENST00000441135 KIAA1211Q6ZU35 1233 aa21.44■■□□□ 1.02
SMPD4-210ENST00000441135 TRPV1Q8NER1 839 aa21.44■■□□□ 1.02
SMPD4-210ENST00000441135 KRT23Q9C075 422 aa21.44■■□□□ 1.02
SMPD4-210ENST00000441135 NRBP1Q9UHY1 535 aa21.44■■□□□ 1.02
SMPD4-210ENST00000441135 COL6A1P12109 1028 aa21.43■■□□□ 1.02
SMPD4-210ENST00000441135 STAT2P52630 851 aa21.43■■□□□ 1.02
SMPD4-210ENST00000441135 FAM160B2Q86V87 743 aa21.43■■□□□ 1.02
SMPD4-210ENST00000441135 CHURC1Q8WUH1 139 aa21.43■■□□□ 1.02
SMPD4-210ENST00000441135 ISY1Q9ULR0 285 aaKnown RBP21.43■■□□□ 1.02
SMPD4-210ENST00000441135 PFASO15067 1338 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 SEPT4O43236 478 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 NMT2O60551 498 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 PGK2P07205 417 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 CYP21A2P08686 494 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 TOP1P11387 765 aaKnown RBP21.42■■□□□ 1.02
SMPD4-210ENST00000441135 ZNF792Q3KQV3 632 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 CHRDL2Q6WN34 429 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 IQCA1Q86XH1 822 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 CPXCR1Q8N123 301 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 LSG1Q9H089 658 aaKnown RBP21.42■■□□□ 1.02
SMPD4-210ENST00000441135 FBXO40Q9UH90 709 aa21.42■■□□□ 1.02
SMPD4-210ENST00000441135 TMEM232C9JQI7 657 aa21.41■■□□□ 1.02
SMPD4-210ENST00000441135 PLA2G6O60733 806 aa21.41■■□□□ 1.02
SMPD4-210ENST00000441135 MCCP23508 829 aa21.41■■□□□ 1.02
SMPD4-210ENST00000441135 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.41■■□□□ 1.02
SMPD4-210ENST00000441135 DGKHQ86XP1 1220 aa21.41■■□□□ 1.02
SMPD4-210ENST00000441135 RAVER2Q9HCJ3 691 aaKnown RBP21.41■■□□□ 1.02
SMPD4-210ENST00000441135 RIPK3Q9Y572 518 aa21.41■■□□□ 1.02
SMPD4-210ENST00000441135 DNM1LO00429 736 aa21.4■■□□□ 1.02
SMPD4-210ENST00000441135 KDM4AO75164 1064 aa21.4■■□□□ 1.02
SMPD4-210ENST00000441135 IKQ13123 557 aaPredicted RBP21.4■■□□□ 1.02
SMPD4-210ENST00000441135 C7orf61Q8IZ16 206 aa21.4■■□□□ 1.02
SMPD4-210ENST00000441135 MSL3Q8N5Y2 521 aaKnown RBP21.4■■□□□ 1.02
SMPD4-210ENST00000441135 CHST13Q8NET6 341 aa21.4■■□□□ 1.02
SMPD4-210ENST00000441135 ANKS1AQ92625 1134 aa21.4■■□□□ 1.02
SMPD4-210ENST00000441135 DDX11Q96FC9 970 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms