RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TPM4P67936 248 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 GPSM2P81274 684 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 TROAPQ12815 778 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 CRHR2Q13324 411 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 TPRNQ4KMQ1 711 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 C12orf60Q5U649 245 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 SPRYD7Q5W111 196 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 OTUD7BQ6GQQ9 843 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 UBE2Q1Q7Z7E8 422 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 SP8Q8IXZ3 490 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 CCDC144CPQ8IYA2 1237 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
HDAC6-209ENST00000440653 NUP133Q8WUM0 1156 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 ANKS1AQ92625 1134 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 FAM163AQ96GL9 167 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-209ENST00000440653 TMX4Q9H1E5 349 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-209ENST00000440653 CBX8Q9HC52 389 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 CD209Q9NNX6 404 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 TCP11L1Q9NUJ3 509 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 MCM9Q9NXL9 1143 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-209ENST00000440653 NR2E3Q9Y5X4 410 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 TTC28Q96AY4 2481 aa10.48□□□□□ -0.73
HDAC6-209ENST00000440653 MYO1BO43795 1136 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 PFKFB1P16118 471 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 CALML3P27482 149 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 TRAPPC10P48553 1259 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 SP3Q02447 781 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 PRKG1Q13976 671 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 PTPAQ15257 358 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 MTFR1Q15390 333 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 AXDND1Q5T1B0 1012 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-209ENST00000440653 RESP18Q5W5W9 173 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
HDAC6-209ENST00000440653 CCDC148Q8NFR7 591 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 NKX2-3Q8TAU0 364 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 AIFM3Q96NN9 605 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 LZTS2Q9BRK4 669 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 PYM1Q9BRP8 204 aaKnown RBP10.47□□□□□ -0.73
HDAC6-209ENST00000440653 ZKSCAN3Q9BRR0 538 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 COA1Q9GZY4 146 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 KAT14Q9H8E8 782 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 SH3GLB2Q9NR46 395 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 FAM13BQ9NYF5 915 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 HPSEQ9Y251 543 aa10.47□□□□□ -0.73
HDAC6-209ENST00000440653 GPR75-ASB3A0A0A6YYF3 556 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 BECN2A8MW95 431 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 RPS12P25398 132 aaKnown RBP10.46□□□□□ -0.73
HDAC6-209ENST00000440653 SYKP43405 635 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 NDUFA8P51970 172 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 FUT2Q10981 343 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 TXNRD3Q86VQ6 643 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 TBC1D16Q8TBP0 767 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 EYA3Q99504 573 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 SDF4Q9BRK5 362 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 HTATIP2Q9BUP3 242 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 PHF20Q9BVI0 1012 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 DNAJC25Q9H1X3 360 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 KIAA1468Q9P260 1216 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 FZD1Q9UP38 647 aa10.46□□□□□ -0.73
HDAC6-209ENST00000440653 LAMA2P24043 3122 aaKnown RBP10.45□□□□□ -0.74
HDAC6-209ENST00000440653 FLT1P17948 1338 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 RPTORQ8N122 1335 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 CYP2D7A0A087X1C5 515 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 RIMBP2O15034 1052 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 PPFIA3O75145 1194 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 BTDP43251 543 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 GRM4Q14833 912 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 DOK7Q18PE1 504 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 MFSD14BQ5SR56 506 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 GALNT17Q6IS24 598 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 LUZP1Q86V48 1076 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 PLA2G4DQ86XP0 818 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 FERMT2Q96AC1 680 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 MRFAP1L1Q96HT8 127 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 GUCD1Q96NT3 240 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 INCENPQ9NQS7 918 aa10.45□□□□□ -0.74
HDAC6-209ENST00000440653 COL2A1P02458 1487 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-209ENST00000440653 A0A1B0GVL5 298 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 MANSC4A6NHS7 340 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-209ENST00000440653 TRIM75PA6NK02 468 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 hCG_1984214I3L0E3 225 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 NEMFO60524 1076 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 PRDM1O75626 825 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 ZNF202O95125 648 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 TSPY3P0CV98 308 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 TSPY8P0CW00 308 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 SCG2P13521 617 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 TERF1P54274 439 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 IQCB1Q15051 598 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 PFKFB3Q16875 520 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-209ENST00000440653 C16orf86Q6ZW13 317 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 TEX11Q8IYF3 940 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 ZNF713Q8N859 430 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-209ENST00000440653 DAGLBQ8NCG7 672 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 SH3RF3Q8TEJ3 882 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-209ENST00000440653 CCDC12Q8WUD4 166 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms