RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 KLRF2D3W0D1 207 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 G3V3G9 751 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 DCAF8Q5TAQ9 597 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 FKBP1CQ5VVH2 108 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 PLA2G4DQ86XP0 818 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 FOXP4Q8IVH2 680 aaPredicted RBP15.04■□□□□ -0
ACTN4-204ENST00000440400 DHX40Q8IX18 779 aaKnown RBP15.04■□□□□ -0
ACTN4-204ENST00000440400 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 SGIP1Q9BQI5 828 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 NYAP2Q9P242 653 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 PI4KBQ9UBF8 816 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 C21orf2O43822 256 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 CDC25BP30305 580 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 SYKP43405 635 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 PICALMQ13492 652 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 ARL6IP4Q66PJ3 421 aaKnown RBP15.04■□□□□ -0
ACTN4-204ENST00000440400 KRBA2Q6ZNG9 492 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 PCDHA6Q9UN73 950 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 PCDHA8Q9Y5H6 950 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 PCDHAC2Q9Y5I4 1007 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 ATAD5Q96QE3 1844 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 LTBP3Q9NS15 1303 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 PPIP5K2O43314 1243 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 C11orf57Q6ZUT1 292 aaPredicted RBP15.04■□□□□ -0
ACTN4-204ENST00000440400 FBXW7Q969H0 707 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 CLIC6Q96NY7 704 aa15.04■□□□□ -0
ACTN4-204ENST00000440400 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 SARSP49591 514 aaKnown RBP15.03■□□□□ -0
ACTN4-204ENST00000440400 NLRP12P59046 1061 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 TTC38Q5R3I4 469 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 SH3RF1Q7Z6J0 888 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 TRIM34Q9BYJ4 488 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 KCNH3Q9ULD8 1083 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 CNTNAP1P78357 1384 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 DDTLA6NHG4 134 aaPredicted RBP15.03■□□□□ -0
ACTN4-204ENST00000440400 ACTN4O43707 911 aaKnown RBP15.03■□□□□ -0
ACTN4-204ENST00000440400 ZNF543Q08ER8 600 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 NOM1Q5C9Z4 860 aaKnown RBP15.03■□□□□ -0
ACTN4-204ENST00000440400 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.03■□□□□ -0
ACTN4-204ENST00000440400 KIAA0825Q8IV33 1275 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 PGAP2Q9UHJ9 254 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 STX8Q9UNK0 236 aa15.03■□□□□ -0
ACTN4-204ENST00000440400 NLRP5P59047 1200 aa15.02■□□□□ -0
ACTN4-204ENST00000440400 GRIN1Q05586 938 aa15.02■□□□□ -0
ACTN4-204ENST00000440400 SPDYE2BA6NHP3 402 aa15.02□□□□□ -0.01
ACTN4-204ENST00000440400 USP17L5A8MUK1 530 aa15.02□□□□□ -0.01
ACTN4-204ENST00000440400 ADCY5O95622 1261 aa15.02□□□□□ -0.01
ACTN4-204ENST00000440400 SPDYE6P0CI01 402 aa15.02□□□□□ -0.01
ACTN4-204ENST00000440400 IRX3P78415 501 aaPredicted RBP15.02□□□□□ -0.01
ACTN4-204ENST00000440400 NAA30Q147X3 362 aaPredicted RBP15.02□□□□□ -0.01
ACTN4-204ENST00000440400 CFAP100Q494V2 611 aa15.02□□□□□ -0.01
ACTN4-204ENST00000440400 AGBL3Q8NEM8 1001 aa15.02□□□□□ -0.01
ACTN4-204ENST00000440400 ZNF165P49910 485 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 MAP3K10Q02779 954 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 SIAH1Q8IUQ4 282 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 GMCL1P1Q8NEA9 526 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 CCDC12Q8WUD4 166 aaPredicted RBP15.01□□□□□ -0.01
ACTN4-204ENST00000440400 DNAJC25Q9H1X3 360 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 DICER1Q9UPY3 1922 aaKnown RBP15.01□□□□□ -0.01
ACTN4-204ENST00000440400 SLFN14P0C7P3 912 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 DCAF4Q8WV16 495 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 RRP36Q96EU6 259 aaKnown RBP15.01□□□□□ -0.01
ACTN4-204ENST00000440400 CSRNP2Q9H175 543 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 LAD1O00515 517 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 PRPHP41219 470 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 LONRF3Q496Y0 759 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 GPATCH4Q5T3I0 446 aaKnown RBP15.01□□□□□ -0.01
ACTN4-204ENST00000440400 RASGRP2Q7LDG7 609 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 LUZP1Q86V48 1076 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 MTFR1LQ9H019 292 aa15.01□□□□□ -0.01
ACTN4-204ENST00000440400 IL17AQ16552 155 aa15□□□□□ -0.01
ACTN4-204ENST00000440400 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
ACTN4-204ENST00000440400 USP17L2Q6R6M4 530 aa15□□□□□ -0.01
ACTN4-204ENST00000440400 SECISBP2LQ93073 1101 aaKnown RBP15□□□□□ -0.01
ACTN4-204ENST00000440400 TBC1D12O60347 775 aa15□□□□□ -0.01
ACTN4-204ENST00000440400 CAPN2P17655 700 aa15□□□□□ -0.01
ACTN4-204ENST00000440400 CLK2P49760 499 aaKnown RBP15□□□□□ -0.01
ACTN4-204ENST00000440400 GPKOWQ92917 476 aaPredicted RBP eCLIP15□□□□□ -0.01
ACTN4-204ENST00000440400 OGFRQ9NZT2 677 aa15□□□□□ -0.01
ACTN4-204ENST00000440400 IKBKBO14920 756 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 E2F4Q16254 413 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 KANK3Q6NY19 840 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 HERC5Q9UII4 1024 aaKnown RBP14.99□□□□□ -0.01
ACTN4-204ENST00000440400 ZNRF3Q9ULT6 936 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 PSMD14O00487 310 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 CT47A1Q5JQC4 288 aaPredicted RBP14.99□□□□□ -0.01
ACTN4-204ENST00000440400 TMEM179Q6ZVK1 233 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 TEX2Q8IWB9 1127 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 GMCL1Q96IK5 515 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 PRMT6Q96LA8 375 aaPredicted RBP14.99□□□□□ -0.01
ACTN4-204ENST00000440400 BCCIPQ9P287 314 aaKnown RBP eCLIP14.99□□□□□ -0.01
ACTN4-204ENST00000440400 PIK3AP1Q6ZUJ8 805 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 KRT25Q7Z3Z0 450 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 TRIML1Q8N9V2 468 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 PYM1Q9BRP8 204 aaKnown RBP14.99□□□□□ -0.01
ACTN4-204ENST00000440400 NAT10Q9H0A0 1025 aaKnown RBP14.99□□□□□ -0.01
ACTN4-204ENST00000440400 KANSL2Q9H9L4 492 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 PIM2Q9P1W9 311 aa14.99□□□□□ -0.01
ACTN4-204ENST00000440400 MYO1BO43795 1136 aa14.98□□□□□ -0.01
ACTN4-204ENST00000440400 LONP1P36776 959 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms