RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 ZMYND12Q9H0C1 365 aa22.57■■□□□ 1.2
APTR-204ENST00000440088 NOL7Q9UMY1 257 aaKnown RBP22.57■■□□□ 1.2
APTR-204ENST00000440088 PNMA6FA0A0J9YX94 578 aa22.56■■□□□ 1.2
APTR-204ENST00000440088 PPP6R2O75170 966 aa22.56■■□□□ 1.2
APTR-204ENST00000440088 SLC16A2P36021 539 aa22.56■■□□□ 1.2
APTR-204ENST00000440088 ECE1P42892 770 aa22.56■■□□□ 1.2
APTR-204ENST00000440088 HIRAP54198 1017 aaPredicted RBP22.56■■□□□ 1.2
APTR-204ENST00000440088 NBPF12Q5TAG4 269 aaPredicted RBP22.56■■□□□ 1.2
APTR-204ENST00000440088 SH2D4AQ9H788 454 aa22.56■■□□□ 1.2
APTR-204ENST00000440088 GOPCQ9HD26 462 aa22.56■■□□□ 1.2
APTR-204ENST00000440088 EARS2Q5JPH6 523 aaKnown RBP22.55■■□□□ 1.2
APTR-204ENST00000440088 DCAF15Q66K64 600 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.55■■□□□ 1.2
APTR-204ENST00000440088 ADARB2Q9NS39 739 aaKnown RBP22.55■■□□□ 1.2
APTR-204ENST00000440088 GINM1Q9NU53 330 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 A0A1W2PQ27 194 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 A0A1W2PQ64 194 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 A0A1W2PQD8 194 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 BMP3P12645 472 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 GNA11P29992 359 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 GPR162Q16538 588 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 DPY19L2Q6NUT2 758 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 CCAR1Q8IX12 1150 aaKnown RBP22.55■■□□□ 1.2
APTR-204ENST00000440088 ACER1Q8TDN7 264 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 MTMR8Q96EF0 704 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 CEP131Q9UPN4 1083 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 PPP2R3BQ9Y5P8 575 aa22.55■■□□□ 1.2
APTR-204ENST00000440088 SYCE3A1L190 88 aa22.54■■□□□ 1.2
APTR-204ENST00000440088 FAM205CA6NFA0 338 aa22.54■■□□□ 1.2
APTR-204ENST00000440088 ZBTB5O15062 677 aa22.54■■□□□ 1.2
APTR-204ENST00000440088 C6orf50Q9HD87 102 aa22.54■■□□□ 1.2
APTR-204ENST00000440088 DACT1Q9NYF0 836 aa22.54■■□□□ 1.2
APTR-204ENST00000440088 PCDHB6Q9Y5E3 794 aa22.54■■□□□ 1.2
APTR-204ENST00000440088 ATAD5Q96QE3 1844 aa22.54■■□□□ 1.2
APTR-204ENST00000440088 ESYT2A0FGR8 921 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 USP17L10C9JJH3 530 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 CTNND1O60716 968 aaKnown RBP22.53■■□□□ 1.2
APTR-204ENST00000440088 LETM1O95202 739 aaPredicted RBP22.53■■□□□ 1.2
APTR-204ENST00000440088 ATP2B1P20020 1258 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 MARCKSP29966 332 aaPredicted RBP22.53■■□□□ 1.2
APTR-204ENST00000440088 PIK3AP1Q6ZUJ8 805 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 DDX19AQ9NUU7 478 aaKnown RBP22.53■■□□□ 1.2
APTR-204ENST00000440088 GOLGA6L3A6NEY3 463 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 SMCO2A6NFE2 343 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 TRIM75PA6NK02 468 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 M0R2N6 131 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 TRAPPC10P48553 1259 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 CCDC73Q6ZRK6 1079 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 NUP88Q99567 741 aaPredicted RBP22.53■■□□□ 1.2
APTR-204ENST00000440088 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.53■■□□□ 1.2
APTR-204ENST00000440088 PITPNM2Q9BZ72 1349 aa22.53■■□□□ 1.2
APTR-204ENST00000440088 NR1I2O75469 434 aa22.52■■□□□ 1.2
APTR-204ENST00000440088 SPICE1Q8N0Z3 855 aa22.52■■□□□ 1.2
APTR-204ENST00000440088 MRPS27Q92552 414 aaKnown RBP22.52■■□□□ 1.2
APTR-204ENST00000440088 ZNF341Q9BYN7 854 aa22.52■■□□□ 1.2
APTR-204ENST00000440088 TMEM232C9JQI7 657 aa22.52■■□□□ 1.19
APTR-204ENST00000440088 ADAMTS3O15072 1205 aa22.52■■□□□ 1.19
APTR-204ENST00000440088 IKQ13123 557 aaPredicted RBP22.52■■□□□ 1.19
APTR-204ENST00000440088 NOM1Q5C9Z4 860 aaKnown RBP22.52■■□□□ 1.19
APTR-204ENST00000440088 AXDND1Q5T1B0 1012 aaPredicted RBP22.52■■□□□ 1.19
APTR-204ENST00000440088 PPP1R18Q6NYC8 613 aa22.52■■□□□ 1.19
APTR-204ENST00000440088 VCPKMTQ9H867 229 aa22.52■■□□□ 1.19
APTR-204ENST00000440088 PCDHA6Q9UN73 950 aa22.52■■□□□ 1.19
APTR-204ENST00000440088 PCDHA8Q9Y5H6 950 aa22.52■■□□□ 1.19
APTR-204ENST00000440088 CCDC194A0A1B0GVG4 234 aa22.51■■□□□ 1.19
APTR-204ENST00000440088 FSD2A1L4K1 749 aa22.51■■□□□ 1.19
APTR-204ENST00000440088 BMP15O95972 392 aa22.51■■□□□ 1.19
APTR-204ENST00000440088 DEKP35659 375 aaKnown RBP22.51■■□□□ 1.19
APTR-204ENST00000440088 FSIP1Q8NA03 581 aa22.51■■□□□ 1.19
APTR-204ENST00000440088 COA7Q96BR5 231 aa22.51■■□□□ 1.19
APTR-204ENST00000440088 LRSAM1Q6UWE0 723 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 BTNL9Q6UXG8 535 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 RASGRP4Q8TDF6 673 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 NUP62CLQ9H1M0 184 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 GOLPH3LQ9H4A5 285 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 GRIN3BO60391 1043 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 FAM160A1Q05DH4 1040 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 TTC38Q5R3I4 469 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 PRAMEF18Q5VWM3 479 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 GAS2L3Q86XJ1 694 aa22.5■■□□□ 1.19
APTR-204ENST00000440088 MORC2Q9Y6X9 1032 aaPredicted RBP22.5■■□□□ 1.19
APTR-204ENST00000440088 PPP1R11O60927 126 aaPredicted RBP22.49■■□□□ 1.19
APTR-204ENST00000440088 CMA1P23946 247 aa22.49■■□□□ 1.19
APTR-204ENST00000440088 STAT2P52630 851 aa22.49■■□□□ 1.19
APTR-204ENST00000440088 CDC37Q16543 378 aaPredicted RBP22.49■■□□□ 1.19
APTR-204ENST00000440088 QRICH1Q2TAL8 776 aa22.49■■□□□ 1.19
APTR-204ENST00000440088 SYDE2Q5VT97 1194 aa22.49■■□□□ 1.19
APTR-204ENST00000440088 KRI1Q8N9T8 703 aaKnown RBP22.49■■□□□ 1.19
APTR-204ENST00000440088 L3MBTL3Q96JM7 780 aaPredicted RBP22.49■■□□□ 1.19
APTR-204ENST00000440088 ZC3H4Q9UPT8 1303 aaKnown RBP22.49■■□□□ 1.19
APTR-204ENST00000440088 POLR2AP24928 1970 aaKnown RBP22.49■■□□□ 1.19
APTR-204ENST00000440088 CUTAO60888 179 aa22.48■■□□□ 1.19
APTR-204ENST00000440088 ZYXQ15942 572 aaKnown RBP22.48■■□□□ 1.19
APTR-204ENST00000440088 SUPT20HL1Q3ZLR7 823 aa22.48■■□□□ 1.19
APTR-204ENST00000440088 KIAA1755Q5JYT7 1200 aa22.48■■□□□ 1.19
APTR-204ENST00000440088 KRT25Q7Z3Z0 450 aa22.48■■□□□ 1.19
APTR-204ENST00000440088 CCDC84Q86UT8 332 aaPredicted RBP22.48■■□□□ 1.19
APTR-204ENST00000440088 FEZ1Q99689 392 aa22.48■■□□□ 1.19
APTR-204ENST00000440088 GLIS2Q9BZE0 524 aaPredicted RBP22.48■■□□□ 1.19
APTR-204ENST00000440088 ZNF112Q9UJU3 913 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms