RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 EVCP57679 992 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 CCT2P78371 535 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 KLRC3Q07444 240 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 TMEM67Q5HYA8 995 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 RCSD1Q6JBY9 416 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 CD99L2Q8TCZ2 262 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 LPAR1Q92633 364 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 MKL1Q969V6 931 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 ARHGAP39Q9C0H5 1083 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 PRDM10Q9NQV6 1147 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 FBXO28Q9NVF7 368 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 ZSWIM5Q9P217 1185 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 MTMR6Q9Y217 621 aa16.9■□□□□ 0.3
TNFRSF1A-204ENST00000440083 PTPDC1A2A3K4 754 aa16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 WDR46O15213 610 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 JAK2O60674 1132 aa16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 NOVP48745 357 aa16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 HERVK_113P62684 666 aa16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 COL13A1Q5TAT6 717 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SLFN13Q68D06 897 aa16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 TXNRD2Q9NNW7 524 aa16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 TCP11L1Q9NUJ3 509 aa16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 PARP14Q460N5 1801 aa16.89■□□□□ 0.29
TNFRSF1A-204ENST00000440083 CCDC69A6NI79 296 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 H3BQV1 296 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 CPLX1O14810 134 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 CTGFP29279 349 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SP3Q02447 781 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 GSE1Q14687 1217 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 CPLX2Q6PUV4 134 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SYNE3Q6ZMZ3 975 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 ENAHQ8N8S7 591 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 NSUN7Q8NE18 718 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 GMCL1P1Q8NEA9 526 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SMARCC2Q8TAQ2 1214 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 ZSCAN10Q96SZ4 725 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 UBAC1Q9BSL1 405 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 MTA3Q9BTC8 594 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 PAGR1Q9BTK6 254 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 TNKSO95271 1327 aa16.88■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 CNMDO75829 334 aa16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 FLOT1O75955 427 aa16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 TOP1P11387 765 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 METAP2P50579 478 aaKnown RBP eCLIP16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 WTAPQ15007 396 aa16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 CSPP1Q1MSJ5 1256 aa16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 ATG4CQ96DT6 458 aa16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SENP2Q9HC62 589 aa16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 NCOA5Q9HCD5 579 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 BRPF3Q9ULD4 1205 aa16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 A0A0G2JMZ2 1700 aa16.87■□□□□ 0.29
TNFRSF1A-204ENST00000440083 ZBTB43O43298 467 aa16.86■□□□□ 0.29
TNFRSF1A-204ENST00000440083 CDKL5O76039 1030 aa16.86■□□□□ 0.29
TNFRSF1A-204ENST00000440083 LIFRP42702 1097 aa16.86■□□□□ 0.29
TNFRSF1A-204ENST00000440083 PPP4R3BQ5MIZ7 849 aa16.86■□□□□ 0.29
TNFRSF1A-204ENST00000440083 IQCA1Q86XH1 822 aa16.86■□□□□ 0.29
TNFRSF1A-204ENST00000440083 LY9Q9HBG7 655 aa16.86■□□□□ 0.29
TNFRSF1A-204ENST00000440083 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SYNPO2Q9UMS6 1093 aa16.86■□□□□ 0.29
TNFRSF1A-204ENST00000440083 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-204ENST00000440083 GOLGA8AA7E2F4 631 aa16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 DTNBO60941 627 aa16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 PRPF40AO75400 957 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 GCLCP48506 637 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 LACTBP83111 547 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SEC23AQ15436 765 aa16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 FOXD4L6Q3SYB3 417 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 FOXD4L3Q6VB84 417 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 KCTD1Q719H9 257 aa16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 LMBRD1Q9NUN5 540 aa16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 BTBD7Q9P203 1132 aa16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SLC12A7Q9Y666 1083 aa16.85■□□□□ 0.29
TNFRSF1A-204ENST00000440083 CTDNEP1O95476 244 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 MBD3O95983 291 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 BMP3P12645 472 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 DSG3P32926 999 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 DEKP35659 375 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 NT5C2P49902 561 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 COG2Q14746 738 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 FAM110CQ1W6H9 321 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 CCDC96Q2M329 555 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 KLHL40Q2TBA0 621 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 Q3C1V9 767 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 APOA5Q6Q788 366 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 SGMS1Q86VZ5 419 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 MICU3Q86XE3 530 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 TMTC2Q8N394 836 aa16.84■□□□□ 0.29
TNFRSF1A-204ENST00000440083 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms