RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 KIAA1551Q9HCM1 1747 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 F5H6K3 240 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 ZBTB22O15209 634 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 CMA1P23946 247 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 JAG1P78504 1218 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 KLRC3Q07444 240 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 UBE2SQ16763 222 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 TMEM179Q6ZVK1 233 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 FMR1NBQ8N0W7 255 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-205ENST00000439958 SPC24Q8NBT2 197 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 ANKS1AQ92625 1134 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 BARHL2Q9NY43 387 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 ENTPD3O75355 529 aa17.19■□□□□ 0.34
CPSF7-205ENST00000439958 PNOCQ13519 176 aa17.19■□□□□ 0.34
CPSF7-205ENST00000439958 ASPRV1Q53RT3 343 aa17.19■□□□□ 0.34
CPSF7-205ENST00000439958 CCDC12Q8WUD4 166 aaPredicted RBP17.19■□□□□ 0.34
CPSF7-205ENST00000439958 CD2APQ9Y5K6 639 aa17.19■□□□□ 0.34
CPSF7-205ENST00000439958 STXBP3O00186 592 aa17.19■□□□□ 0.34
CPSF7-205ENST00000439958 ZNF543Q08ER8 600 aa17.19■□□□□ 0.34
CPSF7-205ENST00000439958 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
CPSF7-205ENST00000439958 ACER1Q8TDN7 264 aa17.19■□□□□ 0.34
CPSF7-205ENST00000439958 NID2Q14112 1375 aa17.19■□□□□ 0.34
CPSF7-205ENST00000439958 CCNT1O60563 726 aaKnown RBP17.18■□□□□ 0.34
CPSF7-205ENST00000439958 AGBL3Q8NEM8 1001 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 A0A1W2PQ27 194 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 A0A1W2PQ64 194 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 A0A1W2PQD8 194 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 CUTAO60888 179 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 REXO1Q8N1G1 1221 aaKnown RBP17.18■□□□□ 0.34
CPSF7-205ENST00000439958 MRIQ9BWK5 157 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 COL4A5P29400 1685 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 SPDYE2Q495Y8 402 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 LONRF3Q496Y0 759 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 EHD4Q9H223 541 aa17.18■□□□□ 0.34
CPSF7-205ENST00000439958 FOXN1O15353 648 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 PPP6R2O75170 966 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 GNA11P29992 359 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 PTGER2P43116 358 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 GMLQ99445 158 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 SPZ1Q9BXG8 430 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 NDUFB10O96000 172 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 DHX8Q14562 1220 aaKnown RBP17.17■□□□□ 0.34
CPSF7-205ENST00000439958 NPY5RQ15761 445 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 KIFC2Q96AC6 838 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 MYH6P13533 1939 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 LAMB1P07942 1786 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 HSP90AA4PQ58FG1 418 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 ENGASEQ8NFI3 743 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 JMJD4Q9H9V9 463 aa17.17■□□□□ 0.34
CPSF7-205ENST00000439958 CCDC173Q0VFZ6 552 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 C11orf57Q6ZUT1 292 aaPredicted RBP17.16■□□□□ 0.34
CPSF7-205ENST00000439958 FAM200AQ8TCP9 573 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 PCDHA1Q9Y5I3 950 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 H7C1D1 291 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 CTAGE5O15320 804 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 ADCY7P51828 1080 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 CBX8Q9HC52 389 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 ARHGEF10LQ9HCE6 1279 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 SERTAD1Q9UHV2 236 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 PCDHA6Q9UN73 950 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 PCDHA8Q9Y5H6 950 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 DDX60LQ5H9U9 1706 aaKnown RBP17.16■□□□□ 0.34
CPSF7-205ENST00000439958 RGPD3A6NKT7 1758 aaPredicted RBP17.16■□□□□ 0.34
CPSF7-205ENST00000439958 RGPD4Q7Z3J3 1758 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 CASP1P29466 404 aa17.16■□□□□ 0.34
CPSF7-205ENST00000439958 GPATCH4Q5T3I0 446 aaKnown RBP17.16■□□□□ 0.34
CPSF7-205ENST00000439958 SYMPKQ92797 1274 aaKnown RBP17.16■□□□□ 0.34
CPSF7-205ENST00000439958 FBXO2Q9UK22 296 aaPredicted RBP17.16■□□□□ 0.34
CPSF7-205ENST00000439958 ZNF541Q9H0D2 1346 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 ADCY5O95622 1261 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 TRIM5Q9C035 493 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L15C9J2P7 530 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L13C9JLJ4 530 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L11C9JVI0 530 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L18D6R9N7 530 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L22D6RA61 530 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L17D6RBQ6 530 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L19D6RCP7 530 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L20D6RJB6 530 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L24Q0WX57 530 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 NONOQ15233 471 aaKnown RBP eCLIP17.15■□□□□ 0.34
CPSF7-205ENST00000439958 STX1AQ16623 288 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 KIF4BQ2VIQ3 1234 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 USP17L6PQ6QN14 398 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 TBCKQ8TEA7 893 aa17.15■□□□□ 0.34
CPSF7-205ENST00000439958 GLIS2Q9BZE0 524 aaPredicted RBP17.15■□□□□ 0.34
CPSF7-205ENST00000439958 PTPREP23469 700 aa17.14■□□□□ 0.34
CPSF7-205ENST00000439958 CDC37Q16543 378 aaPredicted RBP17.14■□□□□ 0.34
CPSF7-205ENST00000439958 FAM83BQ5T0W9 1011 aa17.14■□□□□ 0.34
CPSF7-205ENST00000439958 HACL1Q9UJ83 578 aa17.14■□□□□ 0.34
CPSF7-205ENST00000439958 PP2D1A8MPX8 630 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 QRICH1Q2TAL8 776 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 CREBRFQ8IUR6 639 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 ANO10Q9NW15 660 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 BMP3P12645 472 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms